Curator Dashboard

Software R package for deconvolution of mixed cells from spatial and/or bulk gene expression data. Algorithm for quantifying cell populations defined by single cell sequencing within regions of spatial gene expression studies. Used for mapping cell types in spatial gene expression studies.

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• 10 months ago - by Anonymous

Software to evaluate mean absorbed doses to organs and tumors in radionuclide images, providing simple and fast solution for radionuclide imaging and treatment of new drugs in clinical trials. Calculates radiation doses to organs and the whole body based on established human body models.

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• 10 months ago - by Anonymous

Source code for pose recognition model for laboratory mice based on yolov8. Real-time spatiotemporal network model for robust mouse pose estimation.

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• 10 months ago - submitted by Jensen Palmer

Automated microbial detection system. Instrument for detecting bacteria in biologic and non-biologic samples.

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• 10 months ago - by Anonymous

Core provides services and expert advice on routine and specialized molecular biology techniques including plasmid preps, genome editing, mutation detection, digital PCR and spatial transcriptomics.

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• 10 months ago - submitted by Kym Delventhal

Digital microscope, combining high-resolution imaging with analysis. Whether running fluorescence imaging or brightfield assays, automated imager features comprehensive preconfigured protocols for cell-based assays to shorten learning curve.

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• SciCrunch
• 10 months ago - by Anonymous

Automated microfluidic electrophoresis system that rapidly quantifies and sizes DNA and RNA with high sensitivity using minimal sample volume.

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• 10 months ago - by Anonymous

Provides a range of assay kits, ELISA kits, high-quality antibodies, antigens, recombinant proteins, and DNA/RNA extraction kits all of which undergo stringent quality control measures at every stage of production to ensure they meet the highest standards of precision and reliability.

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• 10 months ago - submitted by Tech Support

Database including classification and annotation of genome-wide transcription factors and transcription cofactors in animal genomes. Annotation and prediction of animal transcription factors.

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• 10 months ago - by Anonymous

Software Python commandline tool for rapid calculation and correction of fragment length specific GC biases in WGS cfDNA sequencing datasets for liquid biopsy applications. Used for evaluating and correcting GC biases in cell-free DNA at fragment level.

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• 10 months ago - by Anonymous

Software R tool for generating brain-predicted age value, using Gaussian Processes regression. Used for generating brain-predicted age value from raw T1-weighted MRI scan.

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• 10 months ago - by Anonymous

A Probabilistic Genome Simulator for Non-uniform Simple, Canonical, and Complex Structural Variations to Facilitate Benchmarking

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• 10 months ago - submitted by Zhen Zhang

Mechanical Core provides variety of fabrication, customization and repair services for mechanical devices and equipment. Offers precision machining of metals and plastics, welding of structural and exotic metals, instrument refurbishing and mechanical repair.

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• 10 months ago - submitted by Matthew Rudy

Software tool as simple wrapper of tabula-java to extract table from PDF into pandas DataFrame. Python wrapper of tabula-java, which can read tables in PDF. Also enables you to convert PDF file into CSV, TSV or JSON file.

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• 10 months ago - by Anonymous

Web portal contains information on how to calculate DNA methylation (DNAm) age based on data measured using the Illumina Infinium platform.

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• 10 months ago - by Anonymous

for RNA, miRNA extraction

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• 10 months ago - submitted by Fatemeh VandRajabpour

Core provides microbial sequencing, high-throughput nucleic acid extraction, microbial cultivation, and strain identification.

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• 10 months ago - submitted by Edyta Vieth

Software R package for computing pseudo-observations for censored data regression. Computes pseudo-observations for modeling: competing risks based on the cumulative incidence function, survival function based on the restricted mean, survival function based on the Kaplan-Meier estimator.

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• 10 months ago - submitted by Mikael Eriksson

Software R package for data cleaning, exploring, and simple reporting. At its core reside the following four functions: freq(), ctable(), descr(), and dfSummary(). Used to quickly and neatly summarize data.

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• 10 months ago - by Anonymous

Database that attempts to consolidate information on known clinical and selected set of pre-clinical biomarkers into single resource. Database includes five major types of biomarkers (condition specific, protein, chemical, karyotypic and genetic) and six biomarker categories (diagnostic, risk, prognostic, safety, monitoring, and response). Provides information such as: biomarker names and synonyms, associated conditions or pathologies, detailed disease descriptions, detailed biomarker descriptions, biomarker specificity, sensitivity and ROC curves, standard reference values (for protein and chemical markers), variants (for SNP or genetic markers), sequence information (for genetic and protein markers), molecular 2D and 3D structures (for protein and chemical markers), tissue or biofluid sources (for protein and chemical markers), chromosomal location and structure (for genetic and karyotype markers), clinical approval status and relevant literature references. Users can browse the data by conditions, condition categories, biomarker types, biomarker categories or search by sequence similarity through the advanced search function.

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• 10 months ago - submitted by Anita Bandrowski