Curator Dashboard

Cogentech's Biological Research Facility (BRF) provides animal facility in which laboratory mice are maintained and bred for different research programs. The laboratory is ISO9001 certified.

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• SciCrunch
• 9 months ago - submitted by Edyta Vieth

Cogentech's Genomic Core Facility (GU) provides professional support for workflow of research projects, from counseling on experimental design to functional interpretation of results. Support includes identification of the most suitable methodology to achieve the experimental aim, quality control of nucleic acid, generation of indexed fragment library, sequencing according to experimental needs and bioinformatic support for selected applications. Customized protocols can be set-up as well. Sequencing data are delivered using a password protected user-friendly web interface. The laboratory is ISO9001 certified.

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• SciCrunch
• 9 months ago - submitted by Edyta Vieth

Cogentech's Histopathology (HP) Core Facility provides services including consultation, tissue trimming and embedding, cutting, staining, photographic documentation for the evaluation and characterization of normal and pathological tissues. Provides Optimization of protocols for new stains or biological specimen.The laboratory is ISO9001 certified.

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• SciCrunch
• 9 months ago - submitted by Edyta Vieth

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 8th,2025. ogentech's Quantitative PCR (QPCR) Core Facility provides services including project design, assay selection and development, data analysis for quantitative analysis of any specific target sequence for gene expression, copy number variation or variant analysis, in low and high-throughput mode. Provides analysis using both Real Time PCR and digital PCR. Special protocols for small amounts of starting material have been implemented. The laboratory is ISO9001 certified.

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• SciCrunch
• 9 months ago - submitted by Edyta Vieth

Core supports basic and clinical research by providing histological and molecular expertise, technical support and consultation to research investigators. Provides histological, molecular and consultation services. Services are performed by American Society of Clinical Pathology certified histologists with expertise in routine histology, whole slide scanning, image and digital analysis, pathology services, immunohistochemistry, tissue microarray, bone histomorphometry, Visium preparations and RNAscope single and co-detection assays.

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• RRID
• 9 months ago - by Anonymous

Core provides researchers with genetic tools, including shRNA, ORF and CRISPR for studying and annotating gene functions in cell-based assays. FGC personnel provides research support for investigators who are interested in genetic screens.

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• RRID
• 9 months ago - by Anonymous

Open-source web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

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• RRID
• 9 months ago - by Anonymous

Software semiempirical extended tight-binding program package. Provides userfriendly interface for performing geometry optimizations, vibrational frequency calculations, and Molecular Dynamics simulations.

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• RRID
• 9 months ago - submitted by Helge Hecht

Software application as quantum chemical based program that enables users to calculate mass spectra using Born-Oppenheimer Molecular Dynamics. Quantum mechanic mass spectrometry calculation program.

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• RRID
• 9 months ago - submitted by Helge Hecht

Software Monte Carlo tool for particle simulation. Used for simulation of medical applications of ionizing radiation with the Monte Carlo method. Allows to assemble and control library of simulation objects (geometry components, particle sources, scorers, etc.) with no need to write C++ code and without knowledge of underlying Geant4 Simulation Toolkit.

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• RRID
• 9 months ago - by Anonymous

Software package provides several functions and parameters for simulating genetic variations. Benchmarking variation simulator mimicking human variation spectrum.

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• RRID
• 9 months ago - submitted by Zhen Zhang

The timsTOF fleX is fully functional high speed, high sensitivity ElectroSpray Ionization (ESI) instrument for all Omics analyses with integrated Matrix-Assisted Laser Desorption Ionization (MALDI) source for fast MALDI Imaging.

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• RRID
• 10 months ago - by Anonymous

Software suite of data collection toolkits that cover range of biomedical research fields. These toolkits provide data collection forms that can be used to build research database and can facilitate phenotype standardisation and harmonisation efforts on African continent and larger user community.

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• 10 months ago - by Anonymous

United States Core Data for Interoperability (USCDI) is standardized set of health data classes and constituent data elements for nationwide, interoperable health information exchange. USCDI is US Government common data elements for patient data.

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• RRID
• 10 months ago - submitted by Anita Bandrowski

Catalogue enables users to search for H3Africa datasets or biospecimens of interest. Catalogue is updated periodically with metadata from studies submitted to H3Africa Archive and corresponding biospecimen metadata uploaded from following biorepositories: IBRH3AU: Makerere University, Uganda; IHVN: Institute of Human Virology, Nigeria; CLS: University of the Witswatersrand School of Pathology, South Africa.

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• RRID
• 10 months ago - by Anonymous

Web portal provides interconnected resources and services for African genomics research data lifecycle management and implementation. African genotype imputation service using diverse African population reference panel. African genomics data hub.

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• 10 months ago - by Anonymous

Catalogue provides searchable metadata for datasets generated and used by the DS-I Africa consortium and external organisations/projects across the African continent.

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• 10 months ago - by Anonymous

AfPO is an ontology that can be used in the study of diverse populations across Africa. It brings together publicly available demographic, anthropological and genetic data relating to African people in standardised and structured format. AfPO can be employed to classify African study participants comprehensively in prospective research studies. It can also be used to classify past study participants by mapping them using language or ethnicity identifier or synonyms.

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• RRID
• 10 months ago - by Anonymous

AGMP provides researchers with platform from which they can retrieve existing information regarding genetic associations to disease-related phenotypes in African populations.

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• 10 months ago - by Anonymous

Database for exploring genomic variation data within African populations.

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• 10 months ago - by Anonymous