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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
The record is no longer available at this source.
Source Database: WB, WormBase (WB)
Genetic Background: (null)
Affected Genes:
Genomic Alteration:
Availability: Not Available
References:
Synonyms:
Notes: (null) This is a legacy resource.
Proper citation: RRID:WB-STRAIN:WN046 Copy
http://www.wormbase.org/db/get?name=WBStrain00000181
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: rmIs130 II.
Notes: Mutagen:Gamma Rays|"rmIs130 [unc-54p::Q24::YFP]. Diffuse distribution of Q24::YFP throughout the body-wall muscle cells."
Proper citation: RRID:WB-STRAIN:WBStrain00000181 Copy
http://www.wormbase.org/db/get?name=WBStrain00000180
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006789(unc-54)
Genomic Alteration: WBGene00006789(unc-54)
Availability: available
References:
Synonyms: rmIs126.
Notes: Made_by: S. Garcia/A Chavez|"Mutagen:Gamma Rays"|"rmIs126 [unc-54p::Q0::YFP]. Diffuse distribution of Q0::YFP throughout the body-wall muscle cells. [NOTE: (04/29/13) Strain is reported as incorrect -- apparently carries 20Q transgene. Working on obtaining a replacement.]"
Proper citation: RRID:WB-STRAIN:WBStrain00000180 Copy
http://www.wormbase.org/db/get?name=WBStrain00000178
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009100(rgef-1)
Genomic Alteration: WBGene00009100(rgef-1)
Availability: available
References:
Synonyms: rmIs110.
Notes: Mutagen:Gamma rays|"rmIs110 [F25B3.3p::Q40::YFP]. Pan-neuronal YFP expression. Reference: Gidalevitz T, et al., Science. 2006 Mar 10;311(5766):1471-4."|"Supplementary_genotype (rmIs110[F25B3.3p::Q40::YFP])"|"Supplementary_genotype rmls110 [F25B3.3p::Q40::YFP]"|"WBStrain provided so WBPaper00061396 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00000178 Copy
http://www.wormbase.org/db/get?name=WBStrain00000179
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009100(rgef-1)
Genomic Alteration: WBGene00009100(rgef-1)
Availability: unknown
References:
Synonyms: EMPTY
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00000179 Copy
http://www.wormbase.org/db/get?name=WBStrain00000176
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: rmIs190.
Notes: Made_by: S Tang & H Brignull|"Mutagen:Gamma rays"|"rmIs190 [F25B3.3p::Q67::CFP]. Pan-neuronal CFP expression."|"Supplementary_genotype rmls190 [F25B3.3p::Q67::CFP]"
Proper citation: RRID:WB-STRAIN:WBStrain00000176 Copy
http://www.wormbase.org/db/get?name=WBStrain00000194
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001803(lite-1)
Genomic Alteration: WBGene00001803(lite-1)
Availability: available
References:
Synonyms: lite-1(ce314) X; wtfIs5.
Notes: wtfIs5 [rab-3p::NLS::GCaMP6s + rab-3p::NLS::tagRFP]. Integrated calcium indicator GCaMP6s and calcium-insensitive fluorescent protein RFP in the nuclei of all neurons in a lite-1(ce314) background. Reference (wtfIs5): Nguyen JP, et al. PLoS Comput Biol. 2017 May 18;13(5):e1005517.|"wtfIs5 [rab-3p::NLS::GCaMP6s + rab-3p::NLS::tagRFP]. Integrated calcium indicator GCaMP6s and calcium-insensitive fluorescent protein RFP in the nuclei of all neurons in a lite-1(ce314) mutant background. Derived from parental strain AML14 by integration of wtfEx4. Reference: Gauthey W, et al. Curr Biol. 2024 Jan 8;34(1):R14-R15. doi: 10.1016/j.cub.2023.10.043. PMID: 38194919."
Proper citation: RRID:WB-STRAIN:WBStrain00000194 Copy
http://www.wormbase.org/db/get?name=WBStrain00000190
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: wtfEx4.
Notes: Made_by: G Plummer & S Setu|"wtfEx4 [rab-3p::NLS::GCaMP6s + rab-3p::NLS::tagRFP]. Pick RFP+ to maintain array. Reference: Nguyen JP, et al. Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1074-81."
Proper citation: RRID:WB-STRAIN:WBStrain00000190 Copy
http://www.wormbase.org/db/get?name=WBStrain00000109
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: rmIs110; uthEx557.
Notes: rmIs110 [F25B3.3p::Q40::YFP]. uthEx557 [sur5p::rpn-6 + myo3p::GFP]. All animals will express YFP in nervous system; pick animals with GFP expression in body wall muscle to maintain. Reference: Vilchez D, et al. Nature. 2012 Sep 13;489(7415):263-8.
Proper citation: RRID:WB-STRAIN:WBStrain00000109 Copy
http://www.wormbase.org/db/get?name=WBStrain00000102
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: uthEx493.
Notes: uthEx493 [crtc-1p::crtc-1 cDNA (S76A)::tdTomato + rol-6(su1006)]. Pick Rollers to maintain. Reference: Mair W, et al. Nature. 2011 Feb 17;470(7334):404-8.
Proper citation: RRID:WB-STRAIN:WBStrain00000102 Copy
http://www.wormbase.org/db/get?name=WBStrain00000185
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: rmIs290.
Notes: Mutagen:Gamma rays|"rmIs290 [unc-54p::Hsa-sod-1 (127X)::YFP]. Array encodes mutated form of human SOD-1. YFP expression in body wall muscle. Array is prone to silencing; maintain by picking worms displaying typical aggregation patterns. Reference: Gidalevitz T, et al., PLoS Genet. 2009 Mar;5(3):e1000399."
Proper citation: RRID:WB-STRAIN:WBStrain00000185 Copy
http://www.wormbase.org/db/get?name=WBStrain00000186
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004323(rde-1)
Genomic Alteration: WBGene00004323(rde-1)
Availability: available
References:
Synonyms: jamSi2 II; rde-1(ne219) V.
Notes: jamSi2 [mex-5p::rde-1(+)] II. mex-5p::rde-1(+) inserted into ttTi5605 on LG II. Tissue-specific RNAi rescue allows silencing in germline and intestine. Reference: Marre JA, et al. Proc Natl Acad Sci USA. 2016.|"WBStrain provided so WBPaper00061852 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00000186 Copy
http://www.wormbase.org/db/get?name=WBStrain00000187
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: zfIs18; zfIs42.
Notes: Made_by: Frederick Shipley|"zfIs18 [mec-4p::ChR2::YFP]. zfIs42 [rig-3p::GCaMP3::SL2::mCherry]. Pick mCherry+ animals to maintain strong expression from zfIs42. Worm expresses light-sensitive Channelrhodopsin (ChR2) and yellow fluorescent protein (YFP) in mechanosensory neurons, ALMR/L, AVM, PLML/R, and PVM. When fed all-trans retinal, blue light stimulation (473 nm at 2 mW * mm^-2) of head induces reversals. GCaMP3 and and mCherry expression in command interneurons AVA, and nearby pharyngeal neurons I1, I4, M4, NSM. Worms were made by crossing the integrated strains QW309 and QW625. Reference: Shipley FB, et al. Front Neural Circuits. 2014 Mar 24;8:28."
Proper citation: RRID:WB-STRAIN:WBStrain00000187 Copy
http://www.wormbase.org/db/get?name=WBStrain00000188
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00023497(lin-15B)|WBGene00023498(lin-15A)
Genomic Alteration: WBGene00023497(lin-15B), WBGene00023498(lin-15A)
Availability: available
References:
Synonyms: otIs355 IV; lin-15B&lin-15A(n765) X; kyIs51.
Notes: otIs355 [rab-3p(prom1)::2xNLS::TagRFP] IV. kyIs51 [odr-2b::GFP + lin-15(+)]. Pan-neuronal nuclear RFP expression. Cytoplasmic GFP expressed in the odr-2b neurons including AIZ, AIB, SIAV, AVG, RIV, ASG and IL2 neurons. Derived from parental strains QW1155 and CX3300. Reference: Nguyen JP, et al. Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):E1074-81.
Proper citation: RRID:WB-STRAIN:WBStrain00000188 Copy
http://www.wormbase.org/db/get?name=WBStrain00000116
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: zcIs4 V; uthIs269.
Notes: zcIs4 [hsp-4::GFP] V. uthIs269 [sur-5p::hsf-1::unc-54 3'UTR + myo-2p::tdTomato::unc-54 3' UTR]. ER stress resistence. Reference: Taylor RC, Dillin A. Cell. 2013 Jun 20;153(7):1435-47.
Proper citation: RRID:WB-STRAIN:WBStrain00000116 Copy
http://www.wormbase.org/db/get?name=WBStrain00000117
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: uthIs270.
Notes: uthIs270 [rab-3p::xbp-1s (constitutively active) + myo-2p::tdTomato]. Pick animals with red pharynx to maintain. Reference: Taylor RC, Dillin A. Cell. 2013 Jun 20;153(7):1435-47.|"WBStrain provided so WBPaper00061805 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00000117 Copy
http://www.wormbase.org/db/get?name=WBStrain00000118
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: uthEx649.
Notes: uthEx649 [rpn-6p::tdTomato + rol-6(su1006)]. Rollers. Pick rollers to maintain array. Reference: Vilchez D, et al. Nature. 2012 Sep 13;489(7415):263-8.
Proper citation: RRID:WB-STRAIN:WBStrain00000118 Copy
http://www.wormbase.org/db/get?name=WBStrain00000114
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001411(fem-1)|WBGene00004510(rrf-3)
Genomic Alteration: WBGene00001411(fem-1), WBGene00004510(rrf-3)
Availability: available
References:
Synonyms: rrf-3(b26) II; fem-1(hc17) IV; uthEx557.
Notes: uthEx557 [sur-5p::rpn-6 + myo-3p::GFP]. Maintain at 15C; sterile at 25C. Pick animals with GFP expression in body wall muscle to maintain. Reference: Vilchez D, et al. Nature. 2012 Sep 13;489(7415):263-8.
Proper citation: RRID:WB-STRAIN:WBStrain00000114 Copy
http://www.wormbase.org/db/get?name=WBStrain00000115
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: EMPTY
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00000115 Copy
http://www.wormbase.org/db/get?name=WBStrain00000196
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004769(sel-12)
Genomic Alteration: WBGene00004769(sel-12)
Availability: available
References:
Synonyms: sel-12(ty11) X.
Notes: Egl. Premature stop codon.|"Made_by: Nese Cinar"
Proper citation: RRID:WB-STRAIN:WBStrain00000196 Copy
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