Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
tsr2hi1116aTg Resource Report Resource Website |
RRID:ZIRC_ZL9873 | Danio rerio | Transgenic Insertion | ceratohyal cartilage, eye, gut, head, heart, liver, pericardium, pharyngeal arch ceratohyal cartilage, eye (all 8) | tsr2hi1116aTg | hi1116aTg | ZL9873 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
atp6v0d1hi2188bTg Resource Report Resource Website |
RRID:ZIRC_ZL9595 | Danio rerio | Transgenic Insertion | cell population proliferation, eye, eye photoreceptor cell, eye pigment granule organization, gut, head, heart looping, intrahepatic bile duct, intrahepatic bile duct development, Kupffer''s vesicle, larval melanophore stripe, melanocyte, melanosome organization, neuromast hair cell, neuron apoptotic process, pigment cell, pigment granule maturation, pronephric duct, pronephros, retinal cell programmed cell death, retinal outer nuclear layer, retinal pigmented epithelium, retinal pigment epithelium development, retina morphogenesis in camera-type eye, trunk, whole organism cell population proliferation, eye (all 26) | atp6v0d1hi2188bTg | hi2188bTg | ZL9595 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:32 | 0 | ||||
|
actl6ahi1072Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1075 | Danio rerio | Transgenic Insertion | brain, central nervous system, eye, gut, head, heart, liver, pericardium, whole organism, yolk brain, central nervous system (all 10) | actl6ahi1072Tg/+ (AB) | hi1072Tg | ZL1075 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | |||
|
smc4hi1143Tg Resource Report Resource Website |
RRID:ZIRC_ZL9354 | Danio rerio | Transgenic Insertion | brain, central nervous system, eye, gut, head, heart, liver, pericardium brain, central nervous system (all 8) | smc4hi1143Tg | hi1143Tg | ZL9354 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
rpl7l1hi1793Tg Resource Report Resource Website |
RRID:ZIRC_ZL9750 | Danio rerio | Transgenic Insertion | extension, eye, head, heart, pericardium, trunk, yolk extension, eye (all 7) | rpl7l1hi1793Tg | hi1793Tg | ZL9750 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
terfahi1182Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL770 | Danio rerio | Transgenic Insertion | terfahi1182Tg/+ (AB) | hi1182Tg | ZL770 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
cwf19l2hi1537Tg Resource Report Resource Website |
RRID:ZIRC_ZL9639 | Danio rerio | Transgenic Insertion | brain, eye, gut, heart, liver, whole organism brain, eye (all 6) | cwf19l2hi1537Tg | hi1537Tg | ZL9639 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
rps12hi1227Tg Resource Report Resource Website |
RRID:ZIRC_ZL9879 | Danio rerio | Transgenic Insertion | extension, eye, fourth ventricle, gut, head, liver, pericardium, whole organism, yolk extension, eye (all 9) | rps12hi1227Tg | hi1227Tg | ZL9879 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
hnf1bahi1843Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL768 | Danio rerio | Transgenic Insertion | anatomical system, anterior commissure, atrioventricular node, cardiac conduction system development, cardiac ventricle, cranial nerve II, digestive tract morphogenesis, endocrine pancreas, endoderm, endoderm development, eye, forebrain, gut, hair cell, head, hepaticobiliary system development, hepatocyte, hindbrain, hindbrain development, hindbrain morphogenesis, inner ear, intestinal bulb, intrahepatic bile duct, islet, kidney, liver, liver development, otic vesicle, otolith, pancreas, pancreas development, pancreatic B cell, pancreatic bud, pericardium, postoptic commissure, pronephric nephron tubule development, pronephric tubule, pronephros, regionalization, regulation of cardiac muscle contraction, rhombomere 4, rhombomere 5, rhombomere 6, semicircular canal, swim bladder, tube formation, type B pancreatic cell development anatomical system, anterior commissure (all 47) | hnf1bahi1843Tg/+ (AB) | hi1843Tg | ZL768 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | |||
|
gtpbp4hi2345Tg Resource Report Resource Website |
RRID:ZIRC_ZL9861 | Danio rerio | Transgenic Insertion | brain, central nervous system, extension, eye, fourth ventricle, gut, head, hindbrain, liver, trunk, yolk brain, central nervous system (all 11) | gtpbp4hi2345Tg | hi2345Tg | ZL9861 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:32 | 0 | ||||
|
plk1hi1856Tg Resource Report Resource Website |
RRID:ZIRC_ZL3120 | Danio rerio | Transgenic Insertion | apoptotic process, brain, caudal fin, cell, central nervous system, chromosome condensation, cranial nerve, embryonic cleavage, eye, head, heart, integument, lens, lens development in camera-type eye, median fin fold, mitotic cell cycle, embryonic, mitotic centrosome separation, mitotic metaphase plate congression, mitotic prometaphase, mitotic sister chromatid separation, mitotic spindle assembly, neural tube, neurocranium, neuron, pericardium, retina, spinal cord, splanchnocranium, tail bud, trunk, whole organism apoptotic process, brain (all 31) | plk1hi1856Tg | hi1856Tg | ZL3120 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:32 | 0 | ||||
|
mcm2hi1244Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1173 | Danio rerio | Transgenic Insertion | brain, central nervous system, endocrine pancreas, eye, gut, head, heart, Kupffer''s vesicle, lateral plate mesoderm, liver, pharyngeal arch 3-7, pronephric duct, retina, thymus, trunk, whole organism brain, central nervous system (all 16) | mcm2hi1244Tg/+ (AB) | hi1244Tg | ZL1173 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | |||
|
sfpqhi1779Tg Resource Report Resource Website |
RRID:ZIRC_ZL3990 | Danio rerio | Transgenic Insertion | anatomical system, anterior commissure, apoptotic process, brain, caudal commissure, cerebellum, cranial motor neuron, cranial nerve II, eye, forebrain, forebrain ventricle, fourth ventricle, head, heart, heart looping, hindbrain, hindbrain commissure, locomotion involved in locomotory behavior, midbrain, midbrain hindbrain boundary, motor neuron, motor neuron migration, musculoskeletal movement, nervous system, optic tectum, pericardium, pigmentation, pigment cell, postoptic commissure, post-vent region, response to external stimulus, sensory system, supraoptic commissure, tectal ventricle, telencephalic ventricle, thigmotaxis, third ventricle, trunk, ventricular system, whole organism, yolk anatomical system, anterior commissure (all 41) | sfpqhi1779Tg | hi1779Tg | ZL3990 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
smc1alhi1113aTg Resource Report Resource Website |
RRID:ZIRC_ZL1691 | Danio rerio | Transgenic Insertion | blood circulation, brain, cellular senescence, central nervous system, cranial cartilage, eye, head, heart, post-vent region, trunk, whole organism, yolk blood circulation, brain (all 12) | smc1alhi1113aTg | hi1113aTg | ZL1691 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | ||||
|
odc1hi1841bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1172 | Danio rerio | Transgenic Insertion | eye, gut, head, liver, retinal photoreceptor layer eye, gut (all 5) | odc1hi1841bTg/+ (AB) | hi1841bTg | ZL1172 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | |||
|
sox9ahi1134Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1056 | Danio rerio | Transgenic Insertion | basal plate cartilage, basihyal cartilage, cartilage development, ceratobranchial 5 bone, ceratobranchial bone, ceratobranchial cartilage, ceratohyal bone, ceratohyal cartilage, chondrocyte, coracoid, cranial cartilage, cranial skeletal system development, dentary, embryonic viscerocranium morphogenesis, entopterygoid, ethmoid cartilage, gut, head, hyomandibula, hyosymplectic cartilage, liver, mandibular arch skeleton, maxilla, Meckel''s cartilage, neurocranial trabecula, neurocranium, opercle, otic vesicle, palatoquadrate arch, palatoquadrate cartilage, parachordal cartilage, pectoral fin, pharyngeal arch 1, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pharyngeal arch cartilage, retroarticular, scapulocoracoid, splanchnocranium, statoacoustic (VIII) ganglion, whole organism basal plate cartilage, basihyal cartilage (all 41) | sox9ahi1134Tg/+ (AB) | hi1134Tg | ZL1056 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 0 | |||
|
wdr33hi2246Tg Resource Report Resource Website |
RRID:ZIRC_ZL9618 | Danio rerio | Transgenic Insertion | eye, gut, head, heart, liver, pericardium eye, gut (all 6) | wdr33hi2246Tg | hi2246Tg | ZL9618 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:32 | 0 | ||||
|
polr1chi1124Tg/+ (AB) Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL1176 | Danio rerio | Transgenic Insertion | cartilage development, ceratobranchial 5 tooth, ceratobranchial cartilage, ceratohyal cartilage, cranial cartilage, cranium, ethmoid cartilage, eye, gut, head, heart, liver, mandibular arch skeleton, Meckel''s cartilage, midbrain hindbrain boundary, neural crest cell fate specification, neuroepithelial cell, opercle, ossification, palate, palatoquadrate cartilage, parasphenoid, pericardium, pharyngeal arch, pharyngeal arch 1, pharyngeal arch 2, pharyngeal arch 3-7, pharyngeal arch cartilage, ribosome biogenesis, rRNA transcription, swim bladder, ventral mandibular arch cartilage development, ceratobranchial 5 tooth (all 32) | polr1chi1124Tg/+ (AB) | hi1124Tg | ZL1176 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:31 | 1 | |||
|
rpl19hi1987Tg Resource Report Resource Website |
RRID:ZIRC_ZL9857 | Danio rerio | Transgenic Insertion | brain, central nervous system, extension, eye, fourth ventricle, gut, head, hindbrain, midbrain hindbrain boundary, peripheral nervous system, trunk, whole organism, yolk brain, central nervous system (all 13) | rpl19hi1987Tg | hi1987Tg | ZL9857 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:32 | 0 | ||||
|
cct3hi1867Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1045 | Danio rerio | Transgenic Insertion | brain, central nervous system, extension, eye, gut, head, heart, liver, myotome, nervous system, optic tectum, retina, sensory system, skeletal muscle, skeletal muscle cell, yolk brain, central nervous system (all 16) | cct3hi1867Tg/+ (AB) | hi1867Tg | ZL1045 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-02-14 01:21:32 | 0 |
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
