Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
CU4010 Resource Report Resource Website |
RRID:TSC_SD01065 | Tetrahymena thermophila | SD01065 | chx1-1/chx1-1; Nulli 4 (CHX1; cy-s, VI) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:47 | 0 | ||||||||
|
CU622 Resource Report Resource Website |
RRID:TSC_SD00371 | Tetrahymena thermophila | SD00371 | Uni 5 [B or C3] (cnj3, pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:47 | 0 | ||||||||
|
VI006 Resource Report Resource Website |
RRID:TSC_SD01741 | Tetrahymena thermophila | The knockout also deletes 213bp of the 5' flanking region and introduces a frameshift mutation. The knockout has been confirmed by paromomycin resistance, but macronuclear allele homozygosity has not been verified. The neo4-KanR2 knockout cassette was generated by cloning fragments of the pNeo4 plasmid's neo4 cassette and the pUC4K plasmid's KanR2 cassette. The KanR2 gene was used for E. coli transformation and is not a selectable marker in Tetrahymena. Submitted by Robert Coyne, J. Craig Venter Institute | ADA2 (TTHERM_00790730) | Micronucleus: PAR1 gene partially replaced by neo4-KanR2 cassette. Macronucleus: ADA2 gene partially replaced by neo4-KanR2 cassette. | SD01741 | mpr1-1/mpr1-1 (MPR1; ADA2/ada2-1[Δ1-537(::neo4, KanR2)]; pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||
|
∆H3 all, gl KO #26 Resource Report Resource Website |
RRID:TSC_SD01864 | Tetrahymena thermophila | homozygous, Neo cassette knockout before we knew there was HHT4 From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HHT (TTHERM_00570560, TTHERM_00189180, TTHERM_00016170) | Micronucleus: Neo3 KO of major H3s and HHT3 | SD01864 | hht1[∆::neo2]/hht1[∆::neo2]; hhf2,hht2[∆::neo2]/hhf2,hht2[∆::neo2]; hht3[∆::neo2]/hht3[∆::neo2] (mpr1-1; pm-s, mp-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:16908532 PMID:15701804 |
2026-02-14 07:54:46 | 0 | ||||
|
RNH1.3 HA-4 Resource Report Resource Website |
RRID:TSC_SD02710 | Tetrahymena thermophila | All Somatic RNH1.3 was replaced by RNH1.3 HA construct. Not sure where the neo3 is. CU428 background. From the Gorovsky lab, University of Rochester. | RNH13 (TTHERM_00283900) | Macronucleus: RNH1.3 with HA tag | SD02710 | mpr1-1/mpr1-1 (rnh1.3[HA]; pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||
|
CU1055 Resource Report Resource Website |
RRID:TSC_SD00777 | Tetrahymena thermophila | Large deletion. May be missing entire right arm of chromosome 1. | SD00777 | chx1-1/chx1-1; pmr1-1/pmr1-1; Del 1R (CHX1; pmr1-1; cy-s, pm-r, II) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||||
|
B* VI (star) Resource Report Resource Website 1+ mentions |
RRID:TSC_SD00022 | Tetrahymena thermophila | B strain star line. Lacks a genetically functional micronucleus. | SD00022 | (VI) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 4 | |||||||
|
BTU1-E431,433,435 D Resource Report Resource Website |
RRID:TSC_SD01914 | Tetrahymena thermophila | Progeny of DB6B x DB2A, transformed by BTU1-1235D mutation construct (E431,433,435D). From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | BTU1 (TTHERM_00348510), BTU2 (TTHERM_00836580) | Micronucleus: knockout of btu1 with neo knockout of btu2 with bsr Macronucleus: BTU1 has only (E431, 433, 435D)) no WT BTU2 is KO | SD01914 | btu1-?[∆::neo1]/ btu1-?[∆::neo1]; btu2-?[∆::bsr1]/ btu2-?[∆::bsr1]; CHX1/CHX1; mpr1-1/mpr1-1 or MPR1/MPR1 (btu2-?[∆::bsr1]; btu1-?[∆::neo1]/ btu1-? [E431D,E433D,E435D]; pm-r, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:10831613 PMID:11864572 |
2026-02-14 07:54:46 | 0 | ||||
|
C3 491 2c Resource Report Resource Website |
RRID:TSC_SD00032 | Tetrahymena thermophila | See Figure 1 on page 13 of Methods in Cell Biology Volume 62, Tetrahymena thermophila 2000 (Editors D.J. Asai and J.D. Forney) for and excellent diagram explaining how the inbred strains are related to each other. Submitted by Eileen Hamilton, University of California, Santa Barbara | SD00032 | wild type C3 (wild type C3; wild type C3, II) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||||
|
SF130 Resource Report Resource Website |
RRID:TSC_SD01641 | Tetrahymena thermophila | rmm = rDNA maturation or maintenance mutation, located in the rDNA Submitted by Eileen Hamilton, University of California, Santa Barbara | SD01641 | rmm12[C3]/rmm12[C3] (mp-s, pm-s, rrm12, III) | TSC, Tetrahymena Stock Center | TSC | PMID:8070657 | 2026-02-14 07:54:46 | 0 | ||||||
|
CU648 Resource Report Resource Website |
RRID:TSC_SD00397 | Tetrahymena thermophila | SD00397 | Uni 1R [chx1-1/chx1-1[B] or CHX1/CHX1[C3]] (cnj3, pm-r, VII) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | ||||||||
|
HTA3-T42F1 Resource Report Resource Website |
RRID:TSC_SD02458 | Tetrahymena thermophila | G304A1xG311A1 ∆HTA3 knockout heterokaryon. Rescued with HTAZ mutated K130R. no ubiquitination of H2AF/Z. Can mate with T42E1 From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | HTA3 (TTHERM_00143660) | Micronucleus: Neo2 in HTAZ Macronucleus: HTAZ coding replaced with mutation K130R | SD02458 | htaz[∆::neo2]/htaz[∆::neo2]; mpr1-1/MPR1-1? (htaz[∆::neo2]/htaz[K130R]; pm-r) | TSC, Tetrahymena Stock Center | TSC | PMID:11430834 PMID:12665578 |
2026-02-14 07:54:46 | 0 | ||||
|
BTU2∆E2 Resource Report Resource Website |
RRID:TSC_SD01922 | Tetrahymena thermophila | Complete disruption of BTU2 by an H4-neo cassette. CU428xB2086 electroporation transformation with histone H4 promoter sequence then neo coding to replace the BTU2 coding region. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | BTU2 (TTHERM_00836580) | Macronucleus: histone H4 promoter sequence then neo coding to replace the BTU2 coding region. | SD01922 | MPR1/mpr1-1 (btu1[∆, H4-neo]; pm-r, IV) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||
|
CU4106 Resource Report Resource Website |
RRID:TSC_SD01010 | Tetrahymena thermophila | SD01010 | mpr1-1/mpr1-1; Nulli 4 (MPR1; mp-s, VII) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | ||||||||
|
D1968-1 Resource Report Resource Website |
RRID:TSC_SD01495 | Tetrahymena thermophila | See Figure 1 on page 13 of Methods in Cell Biology Volume 62, Tetrahymena thermophila 2000 (Editors D.J. Asai and J.D. Forney) for and excellent diagram explaining how the inbred strains are related to each other. Submitted by Eduardo Orias, University of California, Santa Barbara | SD01495 | wild type D (wild type D; wild type D, I) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||||
|
ATU5A-2 Resource Report Resource Website |
RRID:TSC_SD02226 | Tetrahymena thermophila | It is a progeny of conjugants of AAK02.7XAAKO5.5 transformed with pATU5A derived from pTUB100E3-PvuII (linearized)where the ATU1 gene is marked with Hae III and Pvu II sites and E441A, E443A, E445A,E446A,E447A. Slow growth, slow swimming, cytokinesis arrest. From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | ATU1 (TTHERM_00558620) | Micronucleus: neo replaces ATU1 coding Macronucleus: ATU1 with E441A, E443A, E445A, E446A, E447A or neo replacing coding of some ATU1 genes | SD02226 | atu1-1[Δ::neo1]/atu1-1[Δ::neo1]; mpr1-1/mpr1-1 or MPR1/MPR1 (atu1-1[Δ::neo1]/atu1[E441A, E443A, E445A,E446A,E447A ]; pm-r, mp-?, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:9037049 PMID:10831613 |
2026-02-14 07:54:46 | 0 | ||||
|
CU3019 Resource Report Resource Website |
RRID:TSC_SD00969 | Tetrahymena thermophila | Deletion on left arm of chromosome 3. | SD00969 | mpr1-1/mpr1-1; Del 3L (MPR1; mp-s, VII) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:46 | 0 | |||||||
|
RDP1 ∆27.1 Resource Report Resource Website |
RRID:TSC_SD02508 | Tetrahymena thermophila | Cross RDP1del XCU427. No other information From the Gorovsky lab, University of Rochester. This strain has been cataloged by the Stock Center but not thawed. | RDR1 (TTHERM_00853150) | Micronucleus: neo2 into RDR1 | SD02508 | RDR1/rdr1[∆::neo2] (cy-r, ?) | TSC, Tetrahymena Stock Center | TSC | 2026-02-14 07:54:47 | 0 | |||||
|
htb1-K115R-A5a Resource Report Resource Website |
RRID:TSC_SD02470 | Tetrahymena thermophila | New batch, rescue of progeny h∆∆HTB86B4A6 and D2A2. From the Gorovsky lab, University of Rochester. | HTB1 (TTHERM_00633360), HTB2 (TTHERM_00283180) | Micronucleus: neo2 into coding of HTB1 and HTB2 Macronucleus: HTB1 with K115R, HTB2 KO with neo2 | SD02470 | htb1[∆::neo2]/htb1[∆::neo2]; htb2 [∆::neo2]/htb2 [∆::neo2] (htb1[∆::neo2]/htb1[K115R]; htb2 [∆::neo2]; mp-r, II) | TSC, Tetrahymena Stock Center | TSC | PMID:19822522 | 2026-02-14 07:54:46 | 0 | ||||
|
∆DCLI(s)HAT11(1-1) Resource Report Resource Website |
RRID:TSC_SD02591 | Tetrahymena thermophila | Complete somatic DCL1 knockout with HA-tagged Twi11 in the Mic, to study Twi11 localization and loading with scnRNA. Mates with ∆DCL1(s)HAT11(5-1). From the Gorovsky lab, University of Rochester. | DCL1 (TTHERM_00284230), TWI11 (TTHERM_00144830) | Micronucleus: HA tagged TWI 11 Macronucleus: Neo3 KO of DCL1 | SD02591 | dcl1[∆?::neo3]/dcl1[∆?::neo3] (Complete KO of DCL1 with neo3, ?) | TSC, Tetrahymena Stock Center | TSC | PMID:15598983 | 2026-02-14 07:54:46 | 0 |
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
