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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Website Status Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Porifera Ontology
 
Resource Report
Resource Website
1+ mentions
Porifera Ontology (RRID:SCR_000134) PORO data or information resource, ontology, controlled vocabulary An ontology covering the anatomy of Porifera (sponges). owl, anatomy is listed by: BioPortal
is listed by: OBO
is listed by: Google Code
is listed by: Ontobee
is related to: Information Artifact Ontology
Free, Available for download, Freely available nlx_157558 https://code.google.com/p/porifera-ontology/
http://purl.bioontology.org/ontology/PORO
http://purl.obolibrary.org/obo/poro.owl
http://purl.obolibrary.org/obo/poro SCR_000134 2026-02-14 01:59:37 1
Time Event Ontology
 
Resource Report
Resource Website
Time Event Ontology (RRID:SCR_000310) TEO data or information resource, ontology, controlled vocabulary Ontology for representing events, time, and their relationships. owl is listed by: BioPortal nlx_157610 SCR_000310 2026-02-14 01:59:42 0
Variation Ontology
 
Resource Report
Resource Website
Variation Ontology (RRID:SCR_000311) VARIO data or information resource, ontology, controlled vocabulary An ontology for standardized, systematic description of effects, consequences and mechanisms of variations. obo is listed by: BioPortal nlx_157622 SCR_000311 2026-02-14 01:59:41 0
Semantic DICOM Ontology
 
Resource Report
Resource Website
Semantic DICOM Ontology (RRID:SCR_000309) SEDI data or information resource, ontology, controlled vocabulary An ontology for DICOM as used in the SeDI project. owl is listed by: BioPortal nlx_157583 SCR_000309 2026-02-14 01:59:41 0
Human Disease Ontology
 
Resource Report
Resource Website
1+ mentions
Human Disease Ontology (RRID:SCR_000476) DO data or information resource, ontology, controlled vocabulary, database Comprehensive hierarchical controlled vocabulary for human disease representation.Open source ontology for integration of biomedical data associated with human disease. Disease Ontology database represents comprehensive knowledge base of inherited, developmental and acquired human diseases. obo, pathological, organismal, cellular, disease, biomedical, health, neurologic disease, neurological disorder, phenotype, bio.tools, is used by: DOAF
is listed by: BioPortal
is listed by: OBO
is listed by: bio.tools
is listed by: Debian
is related to: PharmGKB Ontology
is related to: GWASdb
is related to: NUgene Project
is related to: FunDO
is related to: Neurocarta
has parent organization: University of Maryland School of Medicine; Maryland; USA
NHGRI U24 HG012557 PMID:22080554 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-35926, nlx_157432, SCR_003491, biotools:disease_ontology http://disease-ontology.org/
https://bio.tools/disease_ontology
http://purl.obolibrary.org/obo/doid.obo
http://do-wiki.nubic.northwestern.edu/index.php/Main_Page SCR_000476 Human Disease Ontology Knowledgebase, Disease Ontology 2026-02-14 01:59:45 5
Gazetteer
 
Resource Report
Resource Website
1+ mentions
Gazetteer (RRID:SCR_000473) GAZ data or information resource, portal, topical portal THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available. obo, owl is listed by: BioPortal
is listed by: OBO
has parent organization: Genomic Standards Consortium
THIS RESOURCE IS NO LONGER IN SERVICE nlx_157412 http://purl.obolibrary.org/obo/gaz.owl
http://build.berkeleybop.org/job/build-gaz/lastSuccessfulBuild/artifact/gaz.obo
http://gensc.org/gc_wiki/index.php/GAZ_Project SCR_000473 2026-02-14 01:59:46 1
Xenopus Anatomy Ontology
 
Resource Report
Resource Website
1+ mentions
Xenopus Anatomy Ontology (RRID:SCR_004337) XAO data or information resource, ontology, controlled vocabulary A structured, controlled vocabulary of the anatomy and development of the African clawed frogs (Xenopus laevis and tropicalis), organized in a graphical structure. Tissues are shown as being part of other tissues and the timing of their development is indicated by start and end stages. The lineage of tissues is represented by develops from relationships between different tissues at different developmental stages. Many items have been classified according to the Common Anatomy Reference Ontology. The Xenopus Anatomical Ontology will be used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes. Its robust developmental map will enable powerful database searches and data analyses. They encourage community recommendations for updates and improvements to the ontology. obo, anatomy, development is listed by: BioPortal
is listed by: OBO
is related to: Bgee: dataBase for Gene Expression Evolution
has parent organization: Xenbase
AHFMR Senior Scholar award ;
NICHD R01HD045776-03
PMID:18817563 The community can contribute to this resource nlx_35222 https://xenopus-anatomy-ontology.googlecode.com/svn/trunk/current-release/xenopus_anatomy.obo
http://purl.bioontology.org/ontology/XAO
http://obofoundry.org/cgi-bin/detail.cgi?id=xenopus_anatomy
SCR_004337 Xenopus anatomy and development ontology 2026-02-14 02:00:42 9
SysMO JERM Ontology of Systems Biology for Micro-Organisms
 
Resource Report
Resource Website
SysMO JERM Ontology of Systems Biology for Micro-Organisms (RRID:SCR_004569) JERM data or information resource, ontology, controlled vocabulary An ontology to describe the entities and relationships in the SEEK database, a Systems Biology environment for the sharing and exchange of data and models. The SysMO-SEEK database contains the work of the SysMO consortium (Systems Biology of Micro-Organisms) https://seek.sysmo-db.org/ owl is listed by: BioPortal
has parent organization: SysMO-DB
nlx_157602 SCR_004569 2026-02-14 02:00:45 0
PR
 
Resource Report
Resource Website
PR (RRID:SCR_004964) PR data or information resource, ontology, controlled vocabulary An ontological representation of protein-related entities by explicitly defining them and showing the relationships between them. Each PRO term represents a distinct class of entities (including specific modified forms, orthologous isoforms, and protein complexes) ranging from the taxon-neutral to the taxon-specific. The ontology has a meta-structure encompassing three areas: proteins based on evolutionary relatedness (ProEvo); protein forms produced from a given gene locus (ProForm); and protein-containing complexes (ProComp). NOTICE: The PRO ID format has changed from PRO: to PR: (e.g. PRO:000000563 is now PR:000000563). database, obo, protein is listed by: BioPortal
has parent organization: Protein Information Resource
has parent organization: Georgetown University; Washington D.C.; USA
NIH ;
NIGMS GM080646-01
nlx_92849 SCR_004964 PRO, Protein Ontology 2026-02-14 02:01:02 0
Gene Ontology
 
Resource Report
Resource Website
10000+ mentions
Gene Ontology (RRID:SCR_002811) GO knowledge environment resource, portal, consortium, data or information resource, organization portal, project portal Computable knowledge regarding functions of genes and gene products. GO resources include biomedical ontologies that cover molecular domains of all life forms as well as extensive compilations of gene product annotations to these ontologies that provide largely species-neutral, comprehensive statements about what gene products do. Used to standardize representation of gene and gene product attributes across species and databases. gene, product, annotation, molecular, function, cellular, biological, role, database, query, obo, gold standard, bio.tools, FASEB list is used by: NIF Data Federation
is used by: GreenPhylDB
is used by: LIPID MAPS Proteome Database
is used by: Aging Portal
is used by: ChannelPedia
is used by: Open PHACTS
is used by: CoPub
is used by: PhenoGO
is used by: Database for Annotation Visualization and Integrated Discovery
is used by: MitoMiner
is used by: dcGO
is used by: Pathway Analysis Tool for Integration and Knowledge Acquisition
is used by: barleyGO
is used by: SynGO
is used by: Functional Annotation
is used by: SwissLipids
is listed by: BioPortal
is listed by: OBO
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
is affiliated with: Mouse Genome Informatics: The Gene Ontology Project
is related to: GenNav
is related to: SynaptomeDB
is related to: High-Throughput GoMiner
is related to: Onto-Design
is related to: OnEx - Ontology Evolution Explorer
is related to: Avadis
is related to: GONUTS
is related to: PiNGO
is related to: Automated Microarray Pipeline
is related to: categoryCompare
is related to: globaltest
is related to: Semantic Measures Library
is related to: WegoLoc
is related to: AnimalTFDB
is related to: MEME Suite - Motif-based sequence analysis tools
is related to: Arabidopsis Hormone Database
is related to: DAVID
is related to: Arabidopsis thaliana Protein Interactome Database
is related to: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer
is related to: pSTIING
is related to: GoMiner
is related to: FunSimMat
is related to: GeneSpeed- A Database of Unigene Domain Organization
is related to: Centre for Modeling Human Disease Gene Trap Resource
is related to: Patterns of Gene Expression in Drosophila Embryogenesis
is related to: Babelomics
is related to: BioPerl
is related to: GeneCruiser
is related to: GOLEM An interactive, graphical gene-ontology visualization, navigation, and analysis tool
is related to: GOToolBox Functional Investigation of Gene Datasets
is related to: Cotton EST Database
is related to: MouseNET
is related to: PLANTTFDB
is related to: T-profiler
is related to: Physico-Chemical Process
is related to: Integrated Molecular Interaction Database
is related to: SEGS
is related to: GOCat
is related to: Quantitative Enrichment of Sequence Tags
is related to: Neural-Immune Gene Ontology
is related to: INMEX
is related to: StRAnGER
is related to: QuickGO
is related to: Repository of molecular brain neoplasia data
is related to: Cardiovascular Gene Ontology Annotation Initiative
is related to: PANTHER
is related to: Short Time-series Expression Miner (STEM)
is related to: DATFAP
is related to: GORetriever
is related to: Gene Ontology Browsing Utility (GOBU)
is related to: GeneTools
is related to: GOSlimViewer
is related to: go-moose
is related to: Network Ontology Analysis
is related to: Onto-Compare
is related to: Onto-Express
is related to: OntoVisT
is related to: STRAP
is related to: CGAP GO Browser
is related to: COBrA
is related to: Gene Class Expression
is related to: GeneInfoViz
is related to: GOfetcher
is related to: GoFish
is related to: GOProfiler
is related to: GOanna
is related to: Manatee
is related to: Pandora - Protein ANnotation Diagram ORiented Analysis
is related to: TAIR Keyword Browser
is related to: Wandora
is related to: GOTaxExplorer
is related to: Onto-Miner
is related to: Onto-Translate
is related to: ToppGene Suite
is related to: DBD - Slim Gene Ontology
is related to: ONTO-PERL
is related to: Blip: Biomedical Logic Programming
is related to: OWL API
is related to: CLENCH
is related to: BiNGO: A Biological Networks Gene Ontology tool
is related to: CateGOrizer
is related to: FuSSiMeG: Functional Semantic Similarity Measure between Gene-Products
is related to: ProteInOn
is related to: GeneMerge
is related to: GraphWeb
is related to: ClueGO
is related to: CLASSIFI - Cluster Assignment for Biological Inference
is related to: GOHyperGAll
is related to: FuncAssociate: The Gene Set Functionator
is related to: GOdist
is related to: FuncExpression
is related to: FunCluster
is related to: FIVA - Functional Information Viewer and Analyzer
is related to: GARBAN
is related to: GOEx - Gene Ontology Explorer
is related to: SGD Gene Ontology Slim Mapper
is related to: GOArray
is related to: SNPsandGO
is related to: GoSurfer
is related to: GOtcha
is related to: MAPPFinder
is related to: GoAnnotator
is related to: MetaGeneProfiler
is related to: OntoGate
is related to: ProfCom - Profiling of complex functionality
is related to: SerbGO
is related to: SOURCE
is related to: Ontologizer
is related to: THEA - Tools for High-throughput Experiments Analysis
is related to: Generic GO Term Mapper
is related to: GREAT: Genomic Regions Enrichment of Annotations Tool
is related to: GoBean - a Java application for Gene Ontology enrichment analysis
is related to: TXTGate
is related to: GO-Module
is related to: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures
is related to: G-SESAME - Gene Semantic Similarity Analysis and Measurement Tools
is related to: MalaCards
is related to: FSST - Functional Similarity Search Tool
is related to: Expression Profiler
is related to: GOChase
is related to: GoPubMed
is related to: Whatizit
is related to: REViGO
is related to: WEGO - Web Gene Ontology Annotation Plot
is related to: Blast2GO
is related to: InterProScan
is related to: PubSearch
is related to: TrED
is related to: CharProtDB: Characterized Protein Database
is related to: VirHostNet: Virus-Host Network
is related to: Pathbase
is related to: GO Online SQL Environment (GOOSE)
is related to: Neurobehavior Ontology
is related to: InterSpecies Analysing Application using Containers
is related to: KOBAS
is related to: ConceptWiki
is related to: GeneTerm Linker
is related to: Bioconductor
is related to: ErmineJ
is related to: Gene Ontology For Functional Analysis (GOFFA)
is related to: MGI GO Browser
is related to: Comparative Toxicogenomics Database (CTD)
is related to: GOEAST - Gene Ontology Enrichment Analysis Software Toolkit
is related to: Ontology Lookup Service
is related to: LexGrid
is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit
is related to: g:Profiler
is related to: OwlSim
is related to: GOrilla: Gene Ontology Enrichment Analysis and Visualization Tool
is related to: YeTFaSCo
is related to: FastSemSim
is related to: RamiGO
is related to: AutismKB
is related to: GeneCodis
is related to: FunSpec
is related to: FunNet - Transcriptional Networks Analysis
is related to: PhenoM - Phenomics of yeast Mutants
is related to: agriGO
is related to: GOblet
is related to: DynGO
is related to: SeqExpress
is related to: ProbeExplorer
is related to: ECgene: Gene Modeling with Alternative Splicing
is related to: Organelle DB
is related to: Gemma
is related to: Candidate Genes to Inherited Diseases
is related to: Proteome Analyst PA-GOSUB
is related to: Network Analysis, Visualization and Graphing TORonto
is related to: GOstat
is related to: Onto-Express To Go (OE2GO)
is related to: Tk-GO
is related to: EGAN: Exploratory Gene Association Networks
is related to: Spotfire
is related to: GOMO - Gene Ontology for Motifs
is related to: GFINDer: Genome Function INtegrated Discoverer
is related to: Generic GO Term Finder
is related to: Agile Protein Interactomes DataServer
is related to: AgingDB
is related to: UBERON
is related to: Algal Functional Annotation Tool
is related to: gsGator
is related to: Flash Gviewer
is related to: Cerebellar Development Transcriptome Database
is related to: PlantNATsDB - Plant Natural Antisense Transcripts DataBase
is related to: EASE: the Expression Analysis Systematic Explorer
is related to: PiGenome
is related to: L2L Microarray Analysis Tool
is related to: MeGO
is related to: CELDA Ontology
is related to: Diabetes Disease Portal
is related to: MatrixDB
is related to: Kidney and Urinary Pathway Knowledge Base
is related to: MouseCyc
is related to: Candida Genome Database
is related to: Honey Bee Brain EST Project
is related to: ECO
is related to: FlyMine
is related to: Gramene
is related to: 3D-Interologs
is related to: Biomine
is related to: UniProtKB
is related to: NCBI BioSystems Database
is related to: EBIMed
is related to: Coremine Medical
is related to: EMAGE Gene Expression Database
is related to: GeneMANIA
is related to: Yeast Search for Transcriptional Regulators And Consensus Tracking
is related to: GeneTrail
is related to: Magic
is related to: Mouse Genome Informatics (MGI)
is related to: FlyBase
is related to: InterPro
is related to: InnateDB
is related to: canSAR
is related to: HPRD - Human Protein Reference Database
is related to: CRCView
is related to: Integrated Manually Extracted Annotation
is related to: LegumeIP
is related to: Renal Disease Portal
is related to: PhenoGO
is related to: DOAF
is related to: OBO
is related to: biomaRt
is related to: OncoboxPD
is parent organization of: AmiGO
is parent organization of: GOlr
is parent organization of: RefGenome
is parent organization of: OBO-Edit
is parent organization of: OWLTools
is parent organization of: Gene Ontology Tools
is parent organization of: Gene Ontology Extension
is parent organization of: SO
is parent organization of: go-db-perl
is parent organization of: go-perl
works with: topGO
works with: DIANA-mirPath
works with: GOnet
European Union QLRI-CT-2001-0098;
European Union QLRI-CT-2001-00015;
NHGRI P41 HG002273
PMID:23161678
PMID:10802651
Free, Freely available, Available for download biotools:go, OMICS_02278, nif-0000-02915 http://bioportal.bioontology.org/ontologies/GO
https://bio.tools/go
SCR_002811 the Gene Ontology, GO, Gene Ontology Resource, Gene Ontology 2026-02-14 02:00:32 10623
Ascomycete Phenotype Ontology
 
Resource Report
Resource Website
Ascomycete Phenotype Ontology (RRID:SCR_003254) APO data or information resource, ontology, controlled vocabulary A structured controlled vocabulary for the phenotypes of Ascomycete fungi. obo, phenotype is listed by: BioPortal
is listed by: OBO
has parent organization: SGD
Free, Freely available nlx_157321 http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/ascomycete_phenotype.obo SCR_003254 2026-02-14 02:00:44 0
Beta Cell Genomics Ontology
 
Resource Report
Resource Website
Beta Cell Genomics Ontology (RRID:SCR_003259) OBI BCGO, BCGO data or information resource, ontology, controlled vocabulary An application ontology built for the Beta Cell Genomics database aiming to support database annotation, complicated semantic queries, and automated cell type classification. The ontology is developed using Basic Formal Ontology (BFO) as upper ontology, Ontology for Biomedical Investigations (OBI) as ontology framework and integrated subsets of multiple OBO Foundry (candidate) ontologies. Current the BCGO contains 2383 classes including terms referencing to 24 various OBO Foundry ontologies including CL, CLO, UBERON, GO, PRO, UO, etc. owl, cell type, classification, ontology, beta cell genomics uses: BFO
uses: Ontology for Biomedical Investigations
is listed by: BioPortal
is listed by: OBO
is listed by: Google Code
is related to: Information Artifact Ontology
has parent organization: Beta Cell Biology Consortium
Free, Available for download, Freely available nlx_157324 https://github.com/obi-bcgo/bcgo SCR_003259 2026-02-14 02:00:31 0
Biological Collections Ontology
 
Resource Report
Resource Website
Biological Collections Ontology (RRID:SCR_003262) BCO data or information resource, ontology, controlled vocabulary Ontology developed as an application ontology as part of the Biocode Commons project whose goal is to support the interoperability of biodiversity data, including data on museum collections, environmental and metagenomic samples, and ecological surveys. It includes consideration of the distinctions between individuals, organisms, voucher specimens, lots, and samples the relations between these entities, and processes governing the creation and use of samples. Within scope as well are properties including collector, location, time, storage environment, containers, institution, and collection identifiers. owl, interoperability, biodiversity, museum collection, environmental sample, metagenomic sample, ecological survey is listed by: BioPortal
is listed by: OBO
is listed by: Google Code
is related to: Information Artifact Ontology
PMID:24595056 Free, Available for download, Freely available nlx_157333 http://purl.obolibrary.org/obo/bco.owl
http://purl.bioontology.org/ontology/BCO
SCR_003262 2026-02-14 02:00:24 0
Lipid Ontology
 
Resource Report
Resource Website
Lipid Ontology (RRID:SCR_003349) LiPrO data or information resource, ontology, controlled vocabulary An ontology that describes the LIPIDMAPS nomenclature classification explicitly using description logics (OWL-DL). Lipid classes are organized hierarchically with the super-classes restricted by generic necessary conditions. More specific necessary conditions are used to define membership requirements for sub classes of lipid according to appropriate functional groups. Lipid research is increasingly integrated within systems level biology such as lipidomics where lipid classification is required before appropriate annotation of chemical functions can be applied. owl, lipid, ontology is listed by: BioPortal
is listed by: OBO
Free, Available for download, Freely available nlx_157458 http://www.lipidprofiles.com/LipidOntology SCR_003349 2026-02-14 02:00:32 0
Measurement Method Ontology
 
Resource Report
Resource Website
Measurement Method Ontology (RRID:SCR_003373) MMO data or information resource, ontology, controlled vocabulary An ontology designed to represent the variety of methods used to make qualitative and quantitative clinical and phenotype measurements both in the clinic and with model organisms. obo, phenotype, clinical is listed by: SourceForge
is listed by: BioPortal
is listed by: OBO
PMID:22654893 Free, Available for download, Freely available nlx_157468 http://sourceforge.net/projects/phenoonto/
ftp://rgd.mcw.edu/pub/ontology/measurement_method/measurement_method.obo
SCR_003373 2026-02-14 02:00:47 0
FMA
 
Resource Report
Resource Website
1+ mentions
FMA (RRID:SCR_003379) FMA ontology, data processing software, data or information resource, data analysis software, controlled vocabulary, software application, software resource, database A domain ontology that represents a coherent body of explicit declarative knowledge about human anatomy. It is concerned with the representation of classes or types and relationships necessary for the symbolic representation of the phenotypic structure of the human body in a form that is understandable to humans and is also navigable, parseable and interpretable by machine-based systems. Its ontological framework can be applied and extended to all other species. The description of how the OWL version was generated is in Pushing the Envelope: Challenges in a Frame-Based Representation of Human Anatomy by N. F. Noy, J. L. Mejino, C. Rosse, M. A. Musen: http://bmir.stanford.edu/publications/view.php/pushing_the_envelope_challenges_in_a_frame_based_representation_of_human_anatomy The Foundational Model of Anatomy ontology has four interrelated components: # Anatomy taxonomy (At), # Anatomical Structural Abstraction (ASA), # Anatomical Transformation Abstraction (ATA), # Metaknowledge (Mk), The ontology contains approximately 75,000 classes and over 120,000 terms; over 2.1 million relationship instances from over 168 relationship types link the FMA's classes into a coherent symbolic model. anatomy, informatics, model, neuroanatomy, protg, reference, standard, structural, taxonomy, owl, phenotype is listed by: BioPortal
is related to: T3DB
is related to: HIV Brain Sequence Database
is related to: CELDA Ontology
has parent organization: University of Washington; Seattle; USA
RSNA-NIBIB ;
University of Washington; Washington; USA ;
Murdock Charitable Trust ;
Microsoft ;
Intel Corporation ;
NLM LM006822;
NLM LM06316;
NLM contract LM03528;
NHLBI HL08770
PMID:18688289
PMID:18360535
PMID:16779026
Free, Freely available nif-0000-00066 http://bioportal.bioontology.org/ontologies/FMA SCR_003379 Foundational Model of Anatomy Ontology, Foundational Model of Anatomy 2026-02-14 02:00:26 8
Malaria Ontology
 
Resource Report
Resource Website
Malaria Ontology (RRID:SCR_003369) IDOMAL data or information resource, ontology, controlled vocabulary An application ontology to cover all aspects of malaria (clinical, epidemiological, biological, etc) as well as the intervention attempts to control it, extending the infectious disease ontology (IDO). obo, health, pathological, clinical, epidemiological, biological, intervention is listed by: BioPortal
is listed by: OBO
has parent organization: AnoBase: An Anopheles database
Malaria Free, Available for download, Freely available nlx_157464 http://purl.obolibrary.org/obo/idomal.obo
http://anobase.vectorbase.org/idomal/IDOMAL.obo
SCR_003369 2026-02-14 02:00:32 0
Dictyostelium Discoideum Anatomy Ontology
 
Resource Report
Resource Website
Dictyostelium Discoideum Anatomy Ontology (RRID:SCR_003309) DDANAT data or information resource, controlled vocabulary A structured controlled vocabulary of the anatomy of the slime-mould Dictyostelium discoideum. obo, anatomy, organismal, cellular is listed by: BioPortal
is listed by: OBO
has parent organization: Dictyostelium discoideum genome database
Free, Available for download, Freely available nlx_157387 http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/anatomy/gross_anatomy/microbial_gross_anatomy/dictyostelium/dictyostelium_anatomy.obo SCR_003309 Dictyostelium discoideum anatomy 2026-02-14 02:00:45 0
Minimal Anatomical Terminology
 
Resource Report
Resource Website
Minimal Anatomical Terminology (RRID:SCR_003385) MAT data or information resource, ontology, controlled vocabulary An ontology of minimal set of terms for anatomy. obo, anatomy, organismal, ontology is listed by: BioPortal
is listed by: OBO
has parent organization: eMouseAtlas
Free, Available for download, Freely available nlx_157480 http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/anatomy/gross_anatomy/animal_gross_anatomy/multispecies/minimal_anatomical_terminology.obo SCR_003385 2026-02-14 02:00:47 0
Common Anatomy Reference Ontology
 
Resource Report
Resource Website
Common Anatomy Reference Ontology (RRID:SCR_003296) CARO data or information resource, ontology, controlled vocabulary An ontology developed to facilitate interoperability between existing anatomy ontologies for different species, and to provide a template for building new anatomy ontologies. obo, anatomy, organismal, ontology, interoperability, template is used by: Teleost Anatomy Ontology
is listed by: BioPortal
is listed by: OBO
Free, Freely available nlx_157369 https://bioportal.bioontology.org/ontologies/CARO SCR_003296 2026-02-14 02:00:45 0

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    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.