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http://purl.bioontology.org/ontology/MDCDRG
Ontology of Medical Diagnostic Categories-Diagnosis Related Groups
Proper citation: Medical Diagnostic Categories - Diagnosis Related Groups (RRID:SCR_003725) Copy
http://purl.bioontology.org/ontology/EMAP
A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus).
Proper citation: Mouse Gross Anatomy and Development Ontology (RRID:SCR_003891) Copy
http://purl.bioontology.org/ontology/SNOMEDCT
Ontology of SNOMED (Systematized Nomenclature of Medicine) clinical terms.
Proper citation: Systematized Nomenclature of Medicine - Clinical Terms (RRID:SCR_003915) Copy
http://purl.bioontology.org/ontology/MPATH
A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes
Proper citation: Mouse Pathology Ontology (RRID:SCR_003950) Copy
http://purl.bioontology.org/ontology/NHSQI2009
Ontology to organise a 2009 set of over 200 NHS quality indicators from different sources. Relationships between indicators, a basic set of inclusion / exclusion criteria, clinical pathway, clinical code and purpose (per 1992 Institute of Medicine, originally intended to categorise clinical guidelines) are identifies and made searchable.
Proper citation: NHS Quality Indicators (RRID:SCR_004005) Copy
http://purl.bioontology.org/ontology/OPB
A reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple structural scales (multiscale atoms to organisms) and multiple physical domains (multidomain fluid dynamics, chemical kinetics, particle diffusion, etc.) that are encountered in the study and analysis of biological organisms.
Proper citation: Ontology of Physics for Biology (RRID:SCR_004144) Copy
An ontology of bioinformatics operations (tool, application, or workflow functions), types of data including identifiers, topics (application domains), and data formats. The applications of EDAM are within organizing tools and data, finding suitable tools in catalogues, and integrating them into complex applications or workflows. Semantic annotations with EDAM are applicable to diverse entities such as for example Web services, databases, programmatic libraries, standalone tools and toolkits, interactive applications, data schemas, data sets, or publications within bioinformatics. Annotation with EDAM may also contribute to data provenance, and EDAM terms and synonyms can be used in text mining. EDAM - and in particular the EDAM Data sub-ontology - serves also as a markup vocabulary for bioinformatics data on the Semantic Web.
Proper citation: EDAM Ontology (RRID:SCR_006620) Copy
http://purl.bioontology.org/ontology/BDO
Ontology that provides a comprehensive and formal representation of the different domain concepts involved in documenting the full complexity of the skeletal dysplasia domain. It captures and combines the genetic features that discriminate the bone dysplasias with the multitude of phenotypic characteristics manifested by patients and required to be taken into account in order to support the diagnosis process.
Proper citation: Bone Dysplasia Ontology (RRID:SCR_006588) Copy
http://www.nlm.nih.gov/research/umls/rxnorm/
Ontology that provides a normalized naming system for generic and branded drugs and a tool for supporting semantic interoperation between drug terminologies and pharmacy knowledge base systems. It contains the names of prescription and many over-the-counter drugs available in the United States and links its names to many of the drug vocabularies commonly used in pharmacy management and drug interaction software. It can mediate messages between systems not using the same software and vocabulary. * RxNorm Download Files - contain data consistent with the 2013AB UMLS Metathesaurus Release Files. * RxNorm API - web service for accessing the current RxNorm data set. * RxNorm Browser (RxNav) - a browser for several drug information sources, including RxNorm, RxTerms and National Drug File - Reference Terminology (NDF-RT) . * Current Prescribable Content - subset of currently prescribable drugs found in RxNorm. * RxTerms Drug Interface Terminology - a drug interface terminology derived from RxNorm for prescription writing or medication history recording
Proper citation: RxNorm (RRID:SCR_006645) Copy
http://purl.bioontology.org/ontology/BSAO
Ontology describing the anatomy and the development of Botryllus schlosseri.
Proper citation: Botryllus schlosseri anatomy and development ontology (RRID:SCR_006602) Copy
http://purl.bioontology.org/ontology/MCBCC
Ontology covering a comprehensive list of cell lines derived from breast tissue, both normal and pathological. The ontology in built in OWL with cross relation to classes- genetic variation, pathological condition, genes, chemicals and drugs. The relations built enable semantic query across different classes
Proper citation: Breast Tissue Cell Lines Ontology (RRID:SCR_006686) Copy
http://purl.bioontology.org/ontology/RPO
A controlled vocabulary of ontology class structures and entities of observed phenotypic terms for primary immunodeficiency diseases (PIDs) that facilitate global sharing and free exchange of PID data with users'' communities
Proper citation: Resource of Asian Primary Immunodeficiency Diseases Phenotype Ontology (RRID:SCR_006776) Copy
http://purl.bioontology.org/ontology/WB-LS
A structured controlled vocabulary of the development of Caenorhabditis elegans.
Proper citation: C. elegans Development Vocabulary (RRID:SCR_006811) Copy
http://purl.bioontology.org/ontology/WB-PHENOTYPE
A structured controlled vocabulary of Caenorhabditis elegans phenotypes.
Proper citation: C. elegans Phenotype Vocabulary (RRID:SCR_006924) Copy
http://purl.bioontology.org/ontology/WB-BT
A structured controlled vocabulary of the anatomy of Caenorhabditis elegans.
Proper citation: C. elegans Gross Anatomy Vocabulary (RRID:SCR_006835) Copy
http://purl.bioontology.org/ontology/IDOBRU
A biomedical ontology in the domain of zoonotic disease brucellosis that is caused by Brucella, a facultative intracellular baterium.
Proper citation: Brucellosis Ontology (RRID:SCR_006795) Copy
http://purl.bioontology.org/ontology/EP
Ontology that contains terms describing single-channel electrophysiological experiments and data obtained using voltage-clamp, current clamp and fluorescence imaging techniques applied at the cell level and multi-channel fluorescence imaging techniques applied at the cell, tissue and whole heart levels.
Proper citation: Cardiac Electrophysiology Ontology (RRID:SCR_007065) Copy
http://purl.bioontology.org/ontology/GRO-CPGA
A structured controlled vocabulary for the anatomy of Gramineae. Please note that this ontology has now been superseded by the Plant Ontology, http://bioportal.bioontology.org/ontologies/1587.
Proper citation: Cereal Plant Gross Anatomy Ontology (RRID:SCR_007061) Copy
http://purl.bioontology.org/ontology/CCONT
ontology for the formal representation of cell lines and their correspnding culture conditions.
Proper citation: Cell Culture Ontology (RRID:SCR_007096) Copy
http://purl.bioontology.org/ontology/CCON
Ontology of Cerrado wood plant dynamics to represent the set of concepts about the dynamics, that is, changes over time of the wood vegetation structure, of Cerrado. Ccon describes the main parameters used to measure the changes, such as mortality rate and recruitment rate.
Proper citation: Cerrado concepts and plant community dynamics (RRID:SCR_007174) Copy
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