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http://crac.gforge.inria.fr/

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Integrated RNA-Seq read analysis., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: CRAC (RRID:SCR_010652) Copy   

•   Source: SciCrunch Registry

https://www.creighton.edu/pharmacy-ot-pt

If Occupational Therapy, Pharmacy, or Physical Therapy is not just a career choice for you - if it''s a calling - then you may belong at Creighton University. For our students, it''s about more than career training. It''s about serving patients. Restoring health. Changing lives. Health care is a serious career, perhaps a lifelong calling. Creighton seeks the cream of the crop for these programs - men and women who feel a genuine calling to serve patients, restore health, and save lives. There''s more for you in Omaha than a vibrant university community. It''s true that U.S. News & World Report lists us as among the best colleges in the Midwest. And that we''ve been educating health professionals for more than a century. We''re also home to one of the world''s leading medical communities. That means training in leading edge facilities and in one of the nation''s best teaching hospitals. Perhaps our greatest distinction, however, is our university-wide commitment to creating an ever better and more just world. You''ll find our PT doctoral students staffing a free clinic for the underserved our pharmacy students conducting drug and alcohol education seminars ... and our OT students volunteering for the Special Olympics. It''s all tied to the values we strive toward as a Jesuit institution.

Proper citation: Creighton University School of Pharmacy and Health Professions (RRID:SCR_010541) Copy   

•   Source: SciCrunch Registry

https://scicrunch.org/

THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017.

Funding opportunities provided by projects or organizations other than government funding opportunities such as those from NIH or NSF.

Proper citation: Community Pilot Funding Opportunity (RRID:SCR_010506) Copy   

•   Source: SciCrunch Registry

http://www.adipogen.com

An Antibody supplier,

Proper citation: AdipoGen (RRID:SCR_010507) Copy   

•   Source: SciCrunch Registry

http://inlab.ibfm.cnr.it/PET_template.php

This is a place holder for this tool. The documentation is not yet available (documented 5/30/2014).

Proper citation: Dementia-specific FDG PET Template for SPM analyses (RRID:SCR_010465) Copy   

•   Source: SciCrunch Registry

http://www.diffusiontools.com/documentation/poas.html

Software toolbox for SPM to denoise diffusion MRI data. Used for diffusion weighted magnetic resonance imaging data enhancement based on structural adaptive smoothing in both voxel space and diffusion-gradient space.Part of the ACID-toolbox.

Proper citation: POAS4SPM (RRID:SCR_010469) Copy   

•   Source: SciCrunch Registry

http://mvz.berkeley.edu/

The Museum of Vertebrate Zoology (MVZ) at the University of California, Berkeley, is a center for research and education in the biology of amphibians, reptiles, birds, and mammals. Founded in 1908, the Museum''s mission is to document and increase understanding of the diversity of terrestrial vertebrates, with particular emphasis on western North America. An MVZ Video Gallery is also available. The superb collections are at the heart of the MVZ program, where methods of field biology are combined with modern laboratory techniques and analytical methods in a comprehensive, synthetic approach. Our goals are to remain at the forefront of international research on evolutionary biology from the perspectives of systematics, ecology, behavior, functional and developmental morphology, population biology, and evolutionary genomics, and to lead the way in developing and using major natural history collections for research, education, and solving problems in biodiversity conservation. Because the MVZ was founded upon a philosophy that organisms should be studied in relationship to their natural environments, its collections are supplemented by extensive ancillary information (e.g., field notes, habitat photographs, tape-recorded vocalizations) that is connected to specimens and/or tissues and enhances their value to researchers. This concept was pioneered at the MVZ and continues to be the primary focus of current research efforts. To this end, there are strong research links between the Museum and the 2,000 acre MVZ/UC field station at Hastings Natural History Reservation. In addition, the MVZ is actively engaged in developing concepts and tools for Biodiversity Informatics through collaborations across the Berkeley Natural History Museums and international consortia.

Proper citation: Museum of Vertebrate Zoology (RRID:SCR_010595) Copy   

•   Source: SciCrunch Registry

https://medschool.ucsd.edu/Pages/default.aspx

Graduate medical school of University of California, San Diego. It was the third medical school in the University of California system, after those established at UCSF and UCLA, and is the only medical school in the San Diego metropolitan area.

Proper citation: University of California San Diego School of Medicine; California; USA (RRID:SCR_010634) Copy   

•   Source: SciCrunch Registry

http://www.abbvie.com/

A research-based biopharmaceutical company that develops advanced therapies to address global health problems.

Proper citation: AbbVie (RRID:SCR_010484) Copy   

•   Source: SciCrunch Registry

http://www.cff.org/

The mission of the Cystic Fibrosis Foundation, a nonprofit donor-supported organization, is to assure the development of the means to cure and control cystic fibrosis and to improve the quality of life for those with the disease. The Foundation is the leading organization in the United States devoted to cystic fibrosis. It funds and accredits more than 115 CF care centers, 95 adult care programs and 50 affiliate programs, and more than 75 chapters and branch offices nationwide. The Cystic Fibrosis Foundation is one of the most efficient organizations of its kind and is an accredited charity of the Better Business Bureau''s Wise Giving Alliance. Until we conquer this disease, our team will work tirelessly to extend and enhance life for those with cystic fibrosis by functioning as: * Scientific pioneers, blazing new trails in CF research; * Fund-raisers, securing the money needed to support our efforts; * Advocates, keeping CF a top priority in government, industry and research; * Investors, funding drug discovery and development; * Caregivers, linking patients and families to specialized CF care; and * Family, offering support, information and resources.

Proper citation: Cystic Fibrosis Foundation (RRID:SCR_010726) Copy   

•   Source: SciCrunch Registry

http://wanglab.pcbi.upenn.edu/coral/

A machine learning software package that can predict the precursor class of small RNAs present in a high-throughput RNA-sequencing dataset. In addition to classification, it also produces information about the features that are most important for discriminating different populations of small non-coding RNAs.

Proper citation: CoRAL - Classification of RNAs by Analysis of Length (RRID:SCR_010828) Copy   

•   Source: SciCrunch Registry

http://paed.hku.hk/uploadarea/yangwl/html/software.html

A toolkit for prioritizing SNVs and indels from next-generation sequencing data.

Proper citation: PriVar (RRID:SCR_010784) Copy   

•   Source: SciCrunch Registry

http://compbio.cs.toronto.edu/CNVer/

A method for CNV detection that supplements the depth-of-coverage with paired-end mapping information, where matepairs mapping discordantly to the reference serve to indicate the presence of variation.

Proper citation: CNVer (RRID:SCR_010820) Copy   

•   Source: SciCrunch Registry

http://sv.gersteinlab.org/cnvnator/

An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing.

Proper citation: CNVnator (RRID:SCR_010821) Copy   

•   Source: SciCrunch Registry

https://code.google.com/p/diplotyper/

A fully automated software tool which is available for Linux to investigate associations between a diplotype group and a phenotype in linear or logistic regression.

Proper citation: Diplotyper (RRID:SCR_010789) Copy   

•   Source: SciCrunch Registry

http://bioinfo-out.curie.fr/projects/freec/tutorial.html

Prediction of copy number alterations and loss of heterozygosity using deep-sequencing data.

Proper citation: Control-FREEC (RRID:SCR_010822) Copy   

•   Source: SciCrunch Registry

http://code.google.com/p/readdepth/

This package for R can detect copy number aberrations by measuring the depth of coverage obtained by massively parallel sequencing of the genome.

Proper citation: readDepth (RRID:SCR_010824) Copy   

•   Source: SciCrunch Registry

https://sites.google.com/site/vibansal/software/hapcut

A max-cut based algorithm for haplotype assembly using sequence reads from the two chromosomes of an individual.

Proper citation: HapCUT (RRID:SCR_010791) Copy   

•   Source: SciCrunch Registry

http://www.popgen.dk/software/index.php/Relate

Software providing a method that estimates the probability of sharing alleles identity by descent (IBD) across the genome and can also be used for mapping disease loci using distantly related individuals.

Proper citation: Relate (RRID:SCR_010794) Copy   

•   Source: SciCrunch Registry

http://www.nig.ac.jp/index-e.html

Institute for genetics, through National BioResource Project, collects, preserves, and provides bio-resources (strains, populations, tissues, cells, genes of animals, plants and microorganisms, and information on these materials for R&D use) that are essential for life science research.

Proper citation: National Institute of Genetics; Shizuoka; Japan (RRID:SCR_010836) Copy   

•   Source: SciCrunch Registry