Tools   Select Another Resource Report Type

https://edspace.american.edu/openbehavior/project/training-mesoscale-imaging/

Project to build and use new generation of home cages with emphasis on training for simple headfixed tasks during simultaneous autonomous acquisition of mesoscale brain imaging data. Homecage platform for automated task training and mesoscale brain imaging for mice developed by University of British Columbia scientists.

Proper citation: Homecage Task Training and Mesoscale Imaging project (RRID:SCR_021580) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/openmv/

Portal provides system capable of frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection (with TensorFlow Lite), and more. Supports very easy to use GUI, the OpenMV IDE.

Proper citation: OpenMV project (RRID:SCR_021579) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/tetroplater/

Portal provides open source circuit for microwire tetrode gold plating. Circuit includes impedance meter and current generator for tetrode gold plating. Developed by University of Toyama scientist.

Proper citation: Tetroplater (RRID:SCR_021578) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/openspritzer/

Portal provides open hardware used in labs for administering picoliters of liquid to biological samples. Pressure ejection system developed by University of Sussex scientist for reliably delivering picolitre volumes.

Proper citation: OpenSpritzer (RRID:SCR_021575) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/pulse-pal/

Portal provides open source, low cost, programmable pulse train generator for physiology and behavior. Device allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Arduino powered device that generates precise sequences of voltage pulses for neural stimulation and stimulus control. Controlled either through its APIs in MATLAB, Python and C plus plus, or as stand-alone instrument using its oLED screen and clickable thumb joystick.

Proper citation: Pulse Pal project (RRID:SCR_021576) Copy   

•   Source: SciCrunch Registry

https://www.nature.com/articles/srep16171#Sec20

Open source program for semi automated analysis of movement and cognitive testing in rodents. Accurately quantifies numerous parameters of movement including travel distance, speed, turning, stationary fraction and laterality. Part of MouseMove system.

Proper citation: MouseMove (RRID:SCR_021618) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/trio-platform/

Portal provides low profile in vivo imaging support and restraint system for mice. System is compact and provides sturdy head fixation, gas anesthesia mask, and warm water bed. Compact design allows to work with variety of microscope stages and use of 3D printed components makes this design customizable.

Proper citation: TRIO Platform (RRID:SCR_021596) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/ipad-visual-discrim/

Portal provides touchscreen platform developed by Texas Christian University scientists. iPad apparatus set up consists of four wall operant chamber, remote desktop program, Visual Basic 6 software, and single wireless iPad. Wireless iPad allows for flexibility in setups during performing visual discrimination behavioral experiments.

Proper citation: Visual Discrimination with an iPad (RRID:SCR_021593) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/chendoscope/

Portal provides open source Compact Head Mounted Endoscope for imaging in freely behaving mouse. Includes accessible and flexible set of calcium imaging tools for neuroscience research community.

Proper citation: CHEndoscope (RRID:SCR_021587) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/craniobot/

Portal provides computer numerical controlled robot for cranial microsurgeries developed by University of Minnesota scientist. Included cranial microsurgery platform combines automated skull surface profiling with computer numerical controlled milling machine to perform variety of cranial microsurgical procedures on mice.

Proper citation: Craniobot project (RRID:SCR_021573) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/pycontrol/

Portal provides system that combines open source hardware and software for control of behavioral experiments. Open source framework, combines Python scripts and Micropython microcontroller. Framework can be run through command line interface, or in user friendly graphical user interface that allows users to manage variety of devices such as nose pokes, LED drivers, stepper motor controllers and more. Data collected using this system can then be imported into Python for data analysis.

Proper citation: pyControl project (RRID:SCR_021574) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/hope/

Portal provides brain implant developed by MIT scientists. Implant carries 16 movable tetrodes along with two optic fibers or two injection cannulas. Designed with help of 3D CAD software, allowing modifications for various experimental needs, such as targeting different brain regions and use in other animal species (e.g., rats and non-human primates). Implant can be designed to shape of skull of individual monkeys based on pre-implantation magnetic resonance imaging, thus optimizing fit with skull surface and making recording from deep brain regions more reliable.

Proper citation: Hybrid-drive combining Optogenetics, Pharmacology, and Electrophysiology project (RRID:SCR_021572) Copy   

•   Source: SciCrunch Registry

https://github.com/HanLabBU/micro-control-final

Teensy microcontroller based interface for optical imaging camera control during behavioral experiments.

Proper citation: Teensy-Based Interface (RRID:SCR_021602) Copy   

•   Source: SciCrunch Registry

https://hackaday.io/project/181604-mri-stereoscope

Project provides miniature mirror stereoscope system for MRI-scanner. System takes advantage of commonly used display equipment, MRI head coil, and display screen. Miniature Wheatstone stereoscope is used for human neuroimaging.

Proper citation: MRI-stereoscope project (RRID:SCR_021655) Copy   

•   Source: SciCrunch Registry

https://github.com/ratcave/ratcave

Software 3D graphics python package for cognitive psychology experiments. Open source, cross platform Python library that adds 3D stimulus support to all OpenGL-based 2D Python stimulus libraries. These libraries include VisionEgg, Psychopy, Pyglet, and PyGam.

Proper citation: Ratcave (RRID:SCR_021599) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/eco-hab/

Portal provides open source, RFID-based system for automated measurement and analysis of social preference and in-cohort sociability in mice. System was developed by Nencki Institute of Experimental Biology scientists.

Proper citation: Eco-HAB (RRID:SCR_021588) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/oculomatic-eye-tracking/

Project related to investigate mechanisms of oculomotor behavior.Included system is provided by New York University scientists to track eye movement.System includes camera module, lens, IR-Light source, mounting solution, data acquisition device, and general purpose PC. System consists of open source software and modular hardware solution to eye tracking for use in humans and non-human primates.

Proper citation: Oculomatic Eye Tracking project (RRID:SCR_021465) Copy   

•   Source: SciCrunch Registry

https://github.com/scimemia/M-Track

Software toolbox for automated detection of forepaw trajectories in mice.Open source code to simultaneously track movement of individual paws during spontaneous grooming episodes and walking in multiple freely behaving mice/rats.

Proper citation: M-Track (RRID:SCR_021508) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/moving-wall-box-mwb/

Portal provides Moving Wall Box system used to testing strategy task where mouse is repeatedly forced to jump over small ice by slowly moving walls whereby presence of animal is automatically sensed via balances and analyzed by microcontroller board which in turn controls movements of walls. Device provided by Max Planck Institute of Psychiatry scientist. Used for repeated assessment of fear coping strategies.

Proper citation: Moving Wall Box (RRID:SCR_021559) Copy   

•   Source: SciCrunch Registry

https://edspace.american.edu/openbehavior/project/ezcalcium/

Software package for MATLAB that makes motion correction, segmentation, signal extraction and dimension reduction, analysis, and visualization of calcium imaging data easy to implement. Open source toolbox for analysis of calcium imaging data.

Proper citation: EZcalcium (RRID:SCR_022354) Copy   

•   Source: SciCrunch Registry