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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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https://www.socr.umich.edu/

SOCR designs, validates and freely disseminates knowledge. The Resource develops AI/ML tools, mathematical models, and end-to-end data analytic protocols for biomedical and health studies. It provides portable online aids for probability, statistics and health science education, promotes technology enhanced instruction, supports efficient statistical computing, supports AI-services, and advances predictive big data analytics. The SOCR platform includes repository of interactive apps, datasets and case-studies, computational tools, visualization approaches, instructional resources, learning materials, and curricular components. SOCR faculty, staff, and students support data and information science collaborations and analytic partnerships involving biomedical, healthcare, and biostatistical investigations.

Proper citation: University of Michigan Statistics Online Computational Resource Core Facility (RRID:SCR_022917) Copy   


https://vivariumandtransgenicscore.vai.org/

Provides genetically modified animal models for our collaborators. For preexisting models provides rederivation or reconstitution for purpose of importing animals into Vivarium barrier. In the absence of preexisting models core works closely with partnering labs to generate their ideal mutation de novo, often using CRISPR technology. Usually beginning with a brief consultation, this process involves discussing factors such as ideal background strain, molecular methods for optimizing the intended genetic change, mutation induction strategies, screening approaches and eventual QC of the new mutant line with the overall goal of giving our collaborators a fully informed, realistic picture of their projects timeframe, pitfalls and workflow. Core provides mouse sperm and embryo cryopreservation services for purpose of archiving and distributing valuable lines. Institute is an AAALAC-accredited facility. All procedures are conducted according to the NIH Guide for the Care and Use of Laboratory Animals.

Proper citation: Van Andel Institute Transgenic Core Facility (RRID:SCR_022914) Copy   


https://www.cshl.edu/research/cancer/microscopy/

Provides access to microscopes, technical advice and expertise in preparing cells or tissues for immunofluorescence/confocal microscopy, live cell imaging, super resolution imaging, transmission electron microscopy, and immunoelectron microscopy.

Proper citation: Cold Spring Harbor Laboratory Microscopy Shared Resource Core Facility (RRID:SCR_023023) Copy   


https://teamhubottawa.com/

Core research facilities include BioImaging Research Node which houses commercial and custom imaging systems and is focused on optical imaging; Tissue Engineering and Biomaterials Testing Research Node equipped with microfluidics 3D bioprinter and mechanical testers, which facilitate development of artificial 3D biological tissue models and biomechanical testing of different biomaterials and biomedical samples; Biochemistry and Molecular Biology Research Node which houses hypoxia chamber and systems for characterization and quantification of proteins, peptides, and nucleic acids; Cellular Biology Research Node to support development and use of 3D tissue models.It houses instruments including flow cytometer for phenotyping and performing functional testing of cells and bacteria, Seahorse Analyzer for evaluation of metabolic activity of cells, and Incucyte for live cell imaging of cells and tissues in culture.

Proper citation: Carleton University Tissue Engineering and Applied Materials Hub Core Facility (RRID:SCR_022968) Copy   


https://www.cores.emory.edu/bcc/

Core is housed in the Department of Biostatistics and Bioinformatics in the Rollins School of Public Health of Emory University. BCC personnel are available for discussion at all stages of research, including: preparation of grants and contracts, assistance in analyzing and presenting research data, and statistical review of manuscripts in publication process. Provides access to computer hardware and software and personnel with expertise in using major statistical, graphics, and data management packages. Offers services from database development, implementation, and maintenance to production of publication quality graphic and tabular material.BCC tasks are classified into short term tasks that can be completed within three to six months with clear deliverables.

Proper citation: Emory University Biostatistics Collaboration Core Facility (RRID:SCR_023521) Copy   


https://cancer.dartmouth.edu/scientists-researchers/microscopy-resource

Light microscopy imaging facility within Dartmouth Cancer Center. Services offered include confocal microscopy with Airyscan, multispectral imaging slide scanner, high thoughput brightfield and multichannel fluorescence microscopy of live cells, multichannel TIRF microscopy, photopatterning and microfabrication.

Proper citation: Dartmouth College Microscopy Shared Resource Core Facility (RRID:SCR_023478) Copy   


https://www.lifespan.org/centers-services/molecular-pathology-core-laboratory

Core of COBRE Center at department of Pathology located on sixth floor of Aldrich building at Rhode Island Hospital.Provides services, instrumentation, training and support. Equipment includes ArcturusXT laser capture microdissector, Stratagene MX3005p realtime PCR instrument, BioRad iCycler, Agilent Bioanalyzer, Olympus fluorescence-capable microscope with image analysis software, Ventana Discovery immunohistochemistry processor, microtome, cryostat, Beecher tissue arrayer and Aperio ScanScope.Tissue bank has 40 cu ft of ultra-low freezer space and provides human tumor tissue samples to all interested investigators who have received IRB approval for academic testing and research.Services include Tissue Sample Processing,Histology,Immunohistochemistry,Digital slide scanning by Aperio ScanScope,Tissue Microarrays,DNA/RNA extraction, Microdissection,Macrodissection verification by pathologist,Digital image analysis,Visium Spatial Gene Expression Assay,RNAscope Assay,Enzyme Linked Immunosorbent Assays (ELISAs),Technical assistance,Pathologist consultation,Technical assistance, Equipment use and training.

Proper citation: Rhode Island Hospital Molecular Pathology Core Facility (RRID:SCR_023490) Copy   


https://uclouvain.be/en/research-institutes/irec/2ip

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 5,2025. Core provided services include paraffin embedding, paraffin and cryo sectioning, histological stainings, immunostainings; Image acquisition includes brightfield, fluorescence and polarized light whole slide imaging,2D fluorescence microscopy, 3D fluorescence microscopy; Image analysis includes 2D images : ImageJ/Fiji support – ZEN Analysis (Zeiss),2D whole slide scans: Author (Visiopharm), Halo (Indicalab), QuPath, 3D images: Arivis (Zeiss), Imaris (Bitplane).

Proper citation: Catholic University of Louvain Institute of Experimental and Clinical Research Imaging Platform Core Facility (RRID:SCR_023378) Copy   


https://hpcc.stanford.edu/

Academic cost recovery center, operates number of HPC clusters to enable larger simulations, deeper analyses, and faster computation times than are possible using computers available to individual researchers. Provides mass data storage and archival systems to store data.

Proper citation: Stanford University High Performance Computing Center Core Facility (RRID:SCR_023411) Copy   


https://maf.stanford.edu/

Facility is equipped with JEOL JXA-8230 SuperProbe electron microprobe. Electron microprobe measures elemental compositions of solid samples by detecting the X-rays emitted on excitation by focused electron beam, down to spatial resolution of about 1 micron. All elements heavier than beryllium can be detected, at concentrations as low as 10s of ppm. Highly quantitative analyses are made using 5 wavelength dispersive X-ray spectrometers (WDS) with calibrations based on known standard materials. Compositional images (maps) can readily be obtained with backscattered electrons (sensitive primarily to mean atomic number), or with WDS or EDS X-ray data. The instrument is adjacent to the Stanford Nanocharacterization Laboratory (SNL), at the west end of the first floor of the McCullough Building.

Proper citation: Stanford Microchemical Analysis Core Facility (RRID:SCR_023256) Copy   


https://sdssemf.stanford.edu/

Provides instruments for solid, aquouse and gas sample analyses, quantitative analysis, technical expertise to members of Stanford community.

Proper citation: Stanford Environmental Measurements Core Facility (RRID:SCR_023255) Copy   


https://www.crg.eu/en/programmes-groups/protein-technologies-unit

Provides technology platform to perform protein production and automated processes in context of biomolecular and biochemical screening assays.Through staff assisted screening, users have access to equipment including liquid handlers, plate readers and small molecule libraries.Unit is aimed at supporting the researchers of the CRG institute by purchasing, seeking and maintaining valuable stocks of clones and strains.

Proper citation: Centre for Genomic Regulation Protein Technologies Unit Core Facility (RRID:SCR_023376) Copy   


https://www.crg.eu/en/programmes-groups/tissue-engineering-unit-0

Provides latests technologies for stem cell biology, stem cell differentiation, organoid formation and induced pluripotent stem cells.Tissue Engineering platform works in collaboration with Biomolecular Screening and Protein Technologies Unit to provide CRISPR/Cas9 genome editing technology service.Unit also includes Histology In-house Service (only for PRBB residents) provides histopathological analysis required for analysing tissues from research performed in in vivo models. Histology In-house Service performs and optimizes histological processing and analysis of tissue, from experimental animal models and human origin.Provides mentoring and training in common histological techniques.

Proper citation: Centre for Genomic Regulation Tissue Engineering Unit Core Facility (RRID:SCR_023375) Copy   


https://cores.utah.edu/cell-imaging/

Core offers services, training and provides access to optical microscopes and imaging.Offers collaboration for complex projects.

Proper citation: University of Utah Cell Imaging Core Facility (RRID:SCR_023496) Copy   


https://sibl.stanford.edu/

Stable Isotope Biogeochemistry Laboratory at Stanford University's School of Earth Sciences provides analytical facilities and technical expertise to members of Stanford community who need to determine stable isotope ratios of variety of organic and inorganic materials from both terrestrial and marine environments.

Proper citation: Stanford Stable Isotope Biogeochemistry Laboratory Core Facility (RRID:SCR_023253) Copy   


https://www.crg.eu/en/programmes-groups/genomics-unit

Supports next generation sequencing technologies and provides several next generation sequencing instruments. Several high-throughput technologies have been implemented to assess differential expression, inter-individual genetic variation, microRNA discovery, genome sequencing, targeted resequencing, epigenetic profiling and identification of binding sites of DNA or RNA-associated proteins.

Proper citation: Centre for Genomic Regulation Genomics Unit Core Facility (RRID:SCR_023374) Copy   


https://neuroscience.stanford.edu/research/neuroscience-community-labs/visualization-lab

Used to explore new visualization technologies related to study of brain.Provides equipment and expertiese to help with project setup and planning. Hosts adaptive optics system that uses optical principles originally developed for visualizing distant stars to enable high resolution imaging of retina in human subjects.

Proper citation: Stanford Visualization Laboratory Core Facility (RRID:SCR_023251) Copy   


https://www.crg.eu/en/programmes-groups/crgupf-flow-cytometry-unit

Flow cytometry studies optical parameters emitted by particles (cells, cell fractions). Flow cytometers can study a series of parameters of individual particles simultaneously, quickly and on a large number of individualized particles in suspension. Flow cytometers use lasers as a source of light excitement; therefore, it must be possible to mark the particles with one or more fluorescent substances. Information is also collected regarding the size and structural complexity of each particle. This multiparameter study of each particle enables us to analyse subpopulations in complex samples through electronic sorting. Some cytometers are also equipped with sorting and collection modules for particles of interest. The most important applications of flow cytometry include those relating to the study of cell surface receptors, nuclear and cytoplasmic antigens, DNA content, enzyme activity, cell integrity and membrane permeability and calcium flows. The Unit currently hosts five analyzers and two sorters, and is therewith the largest Becton Dickinson site in Spain. The sorters are operated by the facility personnel, who also support the users in experimental design and data analysis. The analyzers are operated by the users themselves, after they have been trained. The facility personnel helps with the experimental design and supervises and monitors the experiments when necessary.

Proper citation: Centre for Genomic Regulation Flow Cytometry Unit Core Facility (RRID:SCR_023372) Copy   


https://www.pharmacy.umaryland.edu/centers/massspec/

Provides access to cutting edge technologies in mass spectrometry, methodology, and instrumentation. Provided expertise include the fields of Chemical Biology,Pharmaceutical Biology,Cancer Biology,Microbial Biology,Infectious Disease,Metabolic Disease,Chronic Pain Research,Quantitative Biosciences, Drug Discovery and Drug Development,Translational and Regulatory Sciences,Nanotechnology,.Bioinformatics and Technology Development

Proper citation: University of Maryland School of Pharmacy Mass Spectrometry Center Core Facility (RRID:SCR_023493) Copy   


https://neuroscience.stanford.edu/research/neuroscience-community-labs/gene-vector-and-virus-core

Core centralizes process of producing and distributing viral vectors and cDNA plasmids.

Proper citation: Stanford Neuroscience Gene Vector and Virus Core Facility (RRID:SCR_023250) Copy   



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