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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Capactive Touch Sensor project Resource Report Resource Website |
Capactive Touch Sensor project (RRID:SCR_021486) | data or information resource, instrument resource, portal, project portal | Project related to accurately counting and monitoring the behavior of organisms.Provides open source capacitive touch sensing system.Capacitive sensors are positioned to readily detect direct physical touches from rodent under investigation. Device,designed around capacitive touch sensor MPR121,accurately counts and monitors behavior of organisms. | Capacitive touch sensing system, capacitive sensor, detect direct physical touch, rodent touch, capacitive touch sensor, MPR121 sensor, accurate count, organism behavior monitoring, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1016/j.mex.2020.101024 | Free, Freely available | SCR_021486 | Capactive Touch Sensor | 2026-02-13 10:58:31 | 0 | ||||||||
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Two Armed Bandit Task project Resource Report Resource Website 1+ mentions |
Two Armed Bandit Task project (RRID:SCR_021483) | 2ABT | data or information resource, instrument resource, portal, project portal | Project related to training mice on task that requires continued updating of action/outcome relationships. Behavioral project includes task protocol and corresponding build instructions.Open source behavioral box used to train mice on task that requires continued updating of action/outcome relationships. Permits investigation of motivated behavior that requires flexible relationships between sensory stimuli and motor action. Project provided by Harvard Medical School scientists. | Behavioral box, train mice, action continued updating, outcome relationships updating, motivated behavior investigation, flexible relationships, sensory stimuli, motor action, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: Harvard Medical School; Massachusetts; USA |
Free, Freely available | SCR_021483 | Two Armed Bandit Task | 2026-02-13 10:58:33 | 2 | ||||||||
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FinchScope project Resource Report Resource Website |
FinchScope project (RRID:SCR_021484) | data or information resource, instrument resource, portal, project portal | Project related to fluorescent imaging. Provides single photon fluorescent imaging microscope systems. System includes modular in vivo all optical neurophysiology rigs with transparent hardware, and acquisition and analysis software.Provide designs for 3D printed, lightweight, wireless capable microscope and motorized commutator, designed for multi month monitoring neural activity of zebra finches while they sing their courtship songs. Adapted for rodents and birds such as canaries. | Single photon, fluorescent imaging, microscope systems, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1088/1741-2552/aa6806 | Free, Freely available | SCR_021484 | FinchScope | 2026-02-13 10:58:31 | 0 | ||||||||
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UCLA Miniscope project Resource Report Resource Website 1+ mentions |
UCLA Miniscope project (RRID:SCR_021480) | data or information resource, instrument resource, portal, project portal | Project related to fluorescence imaging to record neural activity in awake, freely behaving mice.Provided system is developed by UCLA scientists. Miniscope system includes Miniscope with single, flexible coaxial cable to carry power, control signals, and imaging data to open source Data Acquisition hardware and software. Open source miniature fluorescence microscope uses wide-field fluorescence imaging to record neural activity in awake, freely behaving mice. | Miniature fluorescence microscope, wide field fluorescence imaging, record neural activity, activity record, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: E-Scope has parent organization: University of California at Los Angeles; California; USA |
SCR_021480 | UCLA Miniscope | 2026-02-13 10:58:33 | 2 | ||||||||||
|
Quantifying Animal Movement from Pre-recorded Videos Resource Report Resource Website |
Quantifying Animal Movement from Pre-recorded Videos (RRID:SCR_021515) | STL | data processing software, software toolkit, software application, image processing software, software resource, image analysis software | Software toolbox for visualizing and quantifying movement from pre-recorded videos.Used for summarizing animal movement data as single image ( spectral time lapse algorithm) as well as automate analysis of animal movement data. | Visualizing movement, quantifying movement, pre-recorded videos movement, summarizing animal movement data, single image, automate analysis, animal movement data, movement tracking, path analysis, video visualization, video summarization, image analysis, OpenBehavior |
is listed by: OpenBehavior is related to: Quantifying Animal Movement from Pre-recorded Videos project |
DOI:10.12688/f1000research.3-19.v1 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/offline-behavior-video-analysis/ | SCR_021515 | Spectral Time Lapse, STL Toolbox | 2026-02-13 10:58:33 | 0 | ||||||
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Platform for Acoustic STArtle Resource Report Resource Website |
Platform for Acoustic STArtle (RRID:SCR_021516) | ratPASTA | data processing software, software toolkit, data visualisation software, software application, software resource | Software package for processing and visualising data from startle experiments in rodents or experiments measuring grip strength in rodents. | Startle experiments, rodent, experiments measuring rodents grip strength, OpenBehavior |
is listed by: OpenBehavior is related to: Platform for Acoustic STArtle project |
DOI:10.1038/s41598-021-82710-6 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pasta/ https://github.com/ikodvanj/ratPASTA/ |
SCR_021516 | Platform for Acoustic STArtle | 2026-02-13 10:58:32 | 0 | ||||||
|
FaceMap Resource Report Resource Website 10+ mentions |
FaceMap (RRID:SCR_021513) | data analysis software, software resource, data processing software, software application | Software toolbox for unsupervised video analysis of rodent behavior.Used for videographic processing of head fixed rodent behavior. | Unsupervised video analysis, rodent behavior, videographic processing, head fixed rodent behavior, head fixed rodent, OpenBehavior |
is listed by: OpenBehavior is related to: FaceMap project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/facemap/ | SCR_021513 | 2026-02-13 10:58:33 | 19 | |||||||||
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Skinner Box Resource Report Resource Website |
Skinner Box (RRID:SCR_021514) | data processing software, data acquisition software, data analysis software, software application, software resource | Software tool for data logging and analysis. | Open Skinner Box, data logging, data analysis, behavioral system, OpenBehavior |
is listed by: OpenBehavior is related to: Skinner Box project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/open-skinner-box/ | SCR_021514 | 2026-02-13 10:58:32 | 0 | |||||||||
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Bonsai Resource Report Resource Website 1+ mentions |
Bonsai (RRID:SCR_021512) | software resource, data processing software, data acquisition software, software application | Software tool as event based framework for processing and controlling data streams. Open source software tool as visual language for reactive programming.Used for composing reactive and asynchronous data streams coming from video cameras, microphones, electrophysiology systems or data acquisition boards. | Reactive programming visual language, composing reactive data streams, composing asynchronous data streams, video cameras data, microphones data, electrophysiology systems data, data acquisition boards, OpenBehavior |
is listed by: OpenBehavior is related to: Bonsai project |
DOI:10.3389/fninf.2015.00007 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/bonsai/ | SCR_021512 | 2026-02-13 10:58:32 | 8 | ||||||||
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Rigbox Resource Report Resource Website 1+ mentions |
Rigbox (RRID:SCR_021517) | data management software, software resource, software application | Open source software MATLAB toolbox for running behavioral neuroscience experiments and managing data.Used for probing neurons and behavior. Used for managing behavioral neuroscience experiments and acquiring experiment related data. | Managing behavioral neuroscience experiments, running behavioral neuroscience experiments, managing data, acquiring experiment related data, OpenBehavior |
is listed by: OpenBehavior is related to: Rigbox project |
DOI:10.1523/eneuro.0406-19.2020 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/rigbox/ | SCR_021517 | 2026-02-13 10:58:34 | 5 | ||||||||
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MNE Scan Resource Report Resource Website 1+ mentions |
MNE Scan (RRID:SCR_021530) | software resource, data processing software, data acquisition software, software application | Software tool for real time processing of electrophysiological data. | Electrophysiological data processing, medical regulatory requirements, build standalone applications, MEG data acquisition, MEG data processing, EEG data acquisition, MEG data acquisition, OpenBehavior |
is listed by: OpenBehavior is related to: MNE Scan project |
DOI:10.1016/j.jneumeth.2018.03.020 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/mne-scan/ | SCR_021530 | 2026-02-13 10:58:32 | 1 | ||||||||
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Ardbark project Resource Report Resource Website |
Ardbark project (RRID:SCR_021494) | data or information resource, instrument resource, portal, project portal | Project related to fear conditioning studies.Includes hardware and software tools. Provides Arduino based device for producing naturalistic stimuli which can be integrated with existing commercial operant chambers with few modifications.. Stores custom made .wav files on SD card, interfaces with Med System and plays the .wav files through ceiling mounted speakers. | Arduino based device, naturalistic stimuli, behavioral response, OpenBehavior, Instrument | is listed by: OpenBehavior | Free, Freely available | SCR_021494 | Ardbark | 2026-02-13 10:58:33 | 0 | |||||||||
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Novel Gustometer for Human Taste Research project Resource Report Resource Website |
Novel Gustometer for Human Taste Research project (RRID:SCR_021495) | data or information resource, instrument resource, portal, project portal | Project related to taste sensory system research in humans on behavioral, electrophysiological and hemodynamic activity levels.Provided system includes hardware and software tools. | Gustometer, taste sensory system, behavioral activity level, electrophysiological activity level, hemodynamic activity level, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.3758/s13428-018-1145-1 | Free, Freely available | SCR_021495 | Novel Gustometer for Human Taste Research | 2026-02-13 10:58:31 | 0 | ||||||||
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Home Cage Automated Skilled Reaching Apparatus project Resource Report Resource Website |
Home Cage Automated Skilled Reaching Apparatus project (RRID:SCR_021492) | HASRA | data or information resource, instrument resource, portal, project portal | Project includes system for individualized training of group housed mice in single pellet reaching task.System allows user to host up to 5 mice in their home environment and automatically administer single pellet reaching test to those animals.Platform for training and assessing skilled reaching in mice with minimal need for experimenter handling. | Individualized training, group housed mice, single pellet reaching task, assessing skilled reaching in mice, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1523/eneuro.0242-20.2020 | Free, Freely available | SCR_021492 | Home Cage Automated Skilled Reaching Apparatus | 2026-02-13 10:58:33 | 0 | |||||||
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Optimouse Resource Report Resource Website 1+ mentions |
Optimouse (RRID:SCR_021527) | data analysis software, software resource, data processing software, software application | Software tool for analysis of mouse position data.Open source software to analyze positions of individual mice, specifically their nose positions, in behavioral arena with the goal of minimizing error. | Mouse position data analysis, mouse position, position data, nose position, OpenBehavior |
is listed by: OpenBehavior is related to: Optimouse project |
DOI:10.1186/s12915-017-0377-3 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/optimouse/ | SCR_021527 | 2026-02-13 10:58:34 | 2 | ||||||||
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DIY-NAMIC project Resource Report Resource Website |
DIY-NAMIC project (RRID:SCR_021489) | data or information resource, instrument resource, portal, project portal | Project is related to measurement of complex phenotypes in homecage. Homecage automated open source behavioral testing sytem to enable high throughput 24h testing of many standard operant paradigms. Using Arduino platform and easily sourced inexpensive components system can display light cues and dispense liquid rewards and has nosepoke receptacles with infrared detectors for operant responses, within homecage.Method provided by Dartmouth College scientists. | Behavioral testing system, homecage, Arduino platform, dispense liquid rewards, nosepoke receptacles, infrared detectors, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: Dartmouth College; New Hampshire; USA |
DOI:10.1523/eneuro.0160-20.2020 | Free, Freely available | SCR_021489 | DIY-NAMIC | 2026-02-13 10:58:33 | 0 | ||||||||
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CapTouch project Resource Report Resource Website |
CapTouch project (RRID:SCR_021488) | data or information resource, instrument resource, portal, project portal | Project related to study learning and memory in preclinical research.Included tracking system for object recognition tasks provides standardization across experiments and labs.Automates scoring process using capacitive sensors, while providing validated 3D-printed objects in order to standardize object recognition to study learning and memory in preclinical research.Used for accurate measurement of interaction time during object recognition tasks. | Tracking system, object recognition tasks, standardization across experiments, automated scoring process, capacitive sensors, standardize object recognition, study learning and memory, accurate measurement, interaction time, OpenBehavior., Instrument | is listed by: OpenBehavior | DOI:10.1523/eneuro.0310-20.2020 | Free, Freely available | SCR_021488 | CapTouch | 2026-02-13 10:58:31 | 0 | ||||||||
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PyMouseTracks Resource Report Resource Website |
PyMouseTracks (RRID:SCR_024453) | PMT | software resource, source code, instrument resource | Open source, adaptable tracking system for multiple rodents. Scalable and customizable system for tracking and behavior assessment consists of Raspberry Pi based video and RFID acquisition. Maximum of six rodents of any coat color can be tracked simultaneously in any user defined arena with few restrictions. For pose estimation and travel trajectory analysis, PyMouseTracks supports interfacing with open source packages such as DeepLabCut and Traja. | OpenBehavior, tracking system, tracking system for multiple rodents, Raspberry Pi based video, RFID acquisition, |
is listed by: OpenBehavior is related to: DeepLabCut |
Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/pymousetracks/ | SCR_024453 | 2026-02-13 10:59:15 | 0 | ||||||||
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LFP Monitoring Resource Report Resource Website |
LFP Monitoring (RRID:SCR_024428) | software resource, source code, instrument resource | Low cost platform for multianimal chronic Local Field Potential video monitoring with Graphical User Interface for seizure detection and behavioral scoring. Enables chronic monitoring of several animals simultaneously, synchronizes bilateral local field potential and video streams in real time, and parses recorded data into manageable file sizes. Hardware solution leverages Intan and Open Ephys acquisition systems and software solution is implemented in Bonsai. Data are synchronized and parsed in Bonsai, allowing for flexibility and scalability of up to 128 channels per animal. The use of Intan adapter board for LFP video recordings allows compatibility with large variety of recording devices. Custom made electrodes and cables were components for the chronic LFP recordings. Used as acquisition system for long term video neurophysiology recordings. | OpenBehavior, acquisition system, long term video neurophysiology recordings, seizure detection, behavioral scoring, multianimal chronic Local Field Potential, video monitoring, LFP video recording, Graphical User Interface for seizure detection and behavioral scoring, Intan adapter board, Open Ephys acquisition system, Bonsai, custom made electrodes and cables, instrument, device, | is listed by: OpenBehavior | PMID:36192155 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/lfpmonitoring/ | SCR_024428 | Local Field Potential video Monitoring | 2026-02-13 10:59:13 | 0 | |||||||
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Brainways Resource Report Resource Website 1+ mentions |
Brainways (RRID:SCR_024402) | software resource, image analysis software, data processing software, software application | Open source software that automatically registers coronal slices and quantifies fluorescent markers. Python based, AI registration algorithm for slice matching to the Waxholm rat atlas. Slice quantification can be trained on any atlas, which allows use for other subjects such as mice, zebrafish, and humans. AI-based software for registration and analysis of fluorescent markers on coronal brain slices. | OpenBehavior, slice quantification, register coronal slices, quantify fluorescent markers, slice matching to atlas, registration and analysis of fluorescent markers, coronal brain slices, | is listed by: OpenBehavior | DOI:10.1101/2023.05.25.542252 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/brainways/ | SCR_024402 | 2026-02-13 10:59:13 | 1 |
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