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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Princeton University Macromolecular Crystallography Core Facility Resource Report Resource Website |
Princeton University Macromolecular Crystallography Core Facility (RRID:SCR_017833) | service resource, core facility, access service resource | Facility helps with structure determination and analysis on service basis, but also encourages users with prior experience to use facilities independently. Offers services for setting up crystallization trials, x-ray data collection, structure determination and structure analysis. Assists in interpretation of existing structures available in Protein Data Bank and assists in homology modeling. | Structure, determination, analysis, crystalization, trial, x-ray, data, collection, homology, modeling, service, core, ABRF | is listed by: ABRF CoreMarketplace | ABRF_614 | SCR_017833 | Macromolecular Crystallography Core Facility | 2026-02-16 09:49:21 | 0 | |||||||||
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Wisconsin-Madison University Biotechnology Center Bioinformatics Resource Center Core Facility Resource Report Resource Website 10+ mentions |
Wisconsin-Madison University Biotechnology Center Bioinformatics Resource Center Core Facility (RRID:SCR_017799) | BRC | service resource, core facility, access service resource | Facility within UW Biotechnology Center (UWBC) for assisting researchers with their data analysis needs. Helps with variety of common sequencing related projects, DNA-seq, ChIP-Seq, RNA-Seq, 16S metagenomics, and small RNA analyses. | Bioinformatics, data, analysis, service, core | Restricted | ABRF_469 | SCR_017799 | Bioinformatics Resource Center | 2026-02-16 09:49:19 | 24 | ||||||||
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Northwestern University High Throughput Analysis Laboratory Core Facility Resource Report Resource Website 1+ mentions |
Northwestern University High Throughput Analysis Laboratory Core Facility (RRID:SCR_017879) | NU-HTA | service resource, core facility, access service resource | Core provides expertise and resources for large scale biology. Helps to set up, run, gather data and perform analysis in drug discovery research, biochemistry, cell and organismal biology, functional genomic screening, and synthetic genetic. Works with proteins, nucleic acids, small model organisms, and microbial strains. Provides tissue culture,produces and uses lentivirus particles, screens compound libraries, does experiments for investigators,generates preliminary data to figure out if idea is workable, discusses project development. Services include Macromolecular binding, biochemical, and cell-based assays,High content screening with widefield or confocal optics,Nanoliter liquid handling up to 1536-well density,Whole-plate kinetic assays (ion currents, GPCR signaling),Compound library screening,CRISPR/Cas9 screening (multiplexed libraries),Analysis of large data sets,Fluorescence Thermal Shift assay (measures protein melting),Complex liquid handling work flows. | Collect, perform, analysis, drug, discovery, biochemistry, cell, organisational, biology, functional, genomic, screening, synthetitc, genetic, data, assay, library, CRISPR, Cas9, kinetic, fluorescence, shift, protein, melting, core, service |
is listed by: ABRF CoreMarketplace has parent organization: Northwestern University; Illinois; USA |
Open | SCR_017771, ABRF_724 | https://coremarketplace.org/?FacilityID=724&citation=1 | SCR_017879 | Northwestern Highthroughput Analysis Laboratory | 2026-02-16 09:49:22 | 2 | ||||||
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University of California San Diego Skaggs School of Pharmacy and Pharmaceutical Sciences NMR Core Facility Resource Report Resource Website |
University of California San Diego Skaggs School of Pharmacy and Pharmaceutical Sciences NMR Core Facility (RRID:SCR_017919) | service resource, core facility, access service resource | Core provides access to NMR technology. Users can collect their own data, facility staff can do it all for you, or collaborative projects can be developed. Provides training in instrument operation and can offer advice for data analysis or project feasibility. Facility houses two 600 MHz Bruker Avance III spectrometers with cryogenically cooled probes. | NMR, technology, access, collect, data, project, development, training, analysis, spectrometer, cryogenically, cooled, probe, service, core | Open | ABRF_800 | SCR_017919 | SSPPS NMR Facility | 2026-02-16 09:49:21 | 0 | |||||||||
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Chicago University Integrated Small Animal Imaging Research Resource Core Facility Resource Report Resource Website 1+ mentions |
Chicago University Integrated Small Animal Imaging Research Resource Core Facility (RRID:SCR_017923) | iSAIRR | service resource, core facility, access service resource | Core offers imaging modalities, techniques, and services for in vivo imaging of small animals and ex vivo imaging of tissue/organ specimens. iSAIRR sub-cores feature magnetic resonance imaging and spectroscopy (MRIS); optical imaging (bioluminescence and fluorescence); positron emission tomography, single photon emission computed tomography, and computed tomography (PET/SPECT/CT).Services include Assistance with experimental design,Assisted and/or independent image acquisition,Veterinary support for all imaging modalities,Assistance with data processing and interpretation. | Imaging, in vivo, small, animal, ex vivo, tissue, organ, magnetic, resonance, spectroscopy, optical, positron, emission, tomography, single, photon, coputed, tomography, data, veterinarian, support, service, core, ABRF | is listed by: ABRF CoreMarketplace | NCI P30 CA014599 | Open | ABRF_805 | SCR_017923 | Integrated Small Animal Imaging Research Resource | 2026-02-16 09:49:21 | 2 | ||||||
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Northwestern University DevSci Neurodevelopmental Core Facility Resource Report Resource Website |
Northwestern University DevSci Neurodevelopmental Core Facility (RRID:SCR_017957) | ND Core | service resource, core facility, access service resource | Core provides services in support of research, education, and assessment technology related to neurodevelopmental research methods. Services include Scientific Consultation, Workshops and Training,EEG/ERP,Eye-tracking,Clinical and Behavioral Measure Services.Services include Data Collection, Use of Equipment, Experimental Task Creation and Preparation. | Neurodevelopmental, collect, code, score, data, consultation, workshop, training, EEG, ERP, eye, tracking, clinical, behavioral, measure, equipment, service, core, ABRF | is listed by: ABRF CoreMarketplace | ABRF_949 | SCR_017957 | Developmental Sciencies Neurodevelopmental Core | 2026-02-16 09:49:22 | 0 | ||||||||
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Virginia Tech Mass Spectrometry Incubator Core Facility Resource Report Resource Website |
Virginia Tech Mass Spectrometry Incubator Core Facility (RRID:SCR_017956) | VT-MSI | service resource, core facility, access service resource | Facility supports Virginia Tech's research infrastructure as mass spectrometry analysis and education center. Provides training in sample preparation, instrument operation and data analysis, with strong emphasis on metadata and analytical requirements for publication of metabolomic and proteomic results. | Mass, spectrometry, incubator, education, training, sample, preparation, instrument, operation, data, analysis, metadata, metabolomics, proteomics, service, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace is related to: USEDit |
Restricted | ABRF_990 | SCR_017956 | Virginia Tech Mass Spectrometry Incubator | 2026-02-16 09:49:24 | 0 | |||||||
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Northern Arizona University Environmental Genetics and Genomics Laboratory Resource Report Resource Website 1+ mentions |
Northern Arizona University Environmental Genetics and Genomics Laboratory (RRID:SCR_017939) | EnGGen | service resource, core facility, access service resource | Core facility for genomics research offers range of DNA sequencing, assistance and advising in planning, data acquisition, and data analysis. Provides genetic and genomic support to environmental and biomedical research projects. Creates education and training opportunities for students and professionals. | Genomics, DNA, sequencing, support, data, acquisition, analysis, training, service, core, ABRF | is listed by: ABRF CoreMarketplace | Open | ABRF_892 | SCR_017939 | NAU Environmental Genetics and Genomics Laboratory | 2026-02-16 09:49:24 | 1 | |||||||
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Gladstone Institutes Histology and Light Microscopy Core Facility Resource Report Resource Website |
Gladstone Institutes Histology and Light Microscopy Core Facility (RRID:SCR_017940) | service resource, core facility, access service resource | Core provides technical assistance, training, consultation and assistance with all aspects of experimental design, sample preparation, image processing, and data analysis to scientists from Gladstone, UCSF, and Bay Area scientific community. Core is equipped with expertise in histological techniques including complex immunolabeling and histological image analysis, high-resolution imaging, confocal microscopy, light-sheet microscopy, spinning disk microscopy, and optical projection tomography and advanced image analysis.Histology Services includeTissue dissection and fixation, Paraffin processing and embedding,Frozen (cryo) processing and embedding,Tissue sectioning,Section staining.Microscopy Services include Epifluorescence, confocal and light sheet microscopy,Whole slide scanning,Microscopy consultation and training,Digital image analysis. | Histology, light, microscopy, experimental, design, support, sample, preparation, image, processing, data, analysis, dissection, fixation, paraffin, embedding, service, core, ABRF | is listed by: ABRF CoreMarketplace | ABRF_872 | SCR_017940 | Histology and Light Microscopy Core | 2026-02-16 09:49:22 | 0 | |||||||||
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Oregon Health and Science University Bioinformatics and Biostatistics Core Facility Resource Report Resource Website |
Oregon Health and Science University Bioinformatics and Biostatistics Core Facility (RRID:SCR_017946) | BBC | service resource, core facility, access service resource | Core provides statistical and big data analysis support. Performs data analysis and manuscript preparation services in Biostatistics, such as statistical genetics, longitudinal, survival, and high-throughput/high-dimensional omics data analysis; and Bioinformatics, such as DNA- and RNA-seq alignment, single cell DNA- and RNA-seq analysis, variant calling, differential expression and pathway analysis, data integration, online data submission, and custom script writing. Provides training to lab staff to enable them to perform future analyses. | Statistical, big, data, analysis, support, analysis, manuscript, preparation, genetics, longitudinal, survival, DNAseq, RNAseq, alignment, single, cell, variant, calling, differential, expression, pathway, integration, custom, service, core, ABRF, USEDit |
is listed by: ABRF CoreMarketplace has parent organization: Oregon Health and Science University; Oregon; USA |
NIH Office of the Director P51 OD011092 | Open | ABRF_894 | https://coremarketplace.org/?FacilityID=894&citation=1 | SCR_017946 | Oregon Health and Science University Bioinformatics and Biostatistics Core, Bioinformatics and Biostatistics Core | 2026-02-16 09:49:23 | 0 | |||||
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Nencki-Monash template Resource Report Resource Website 1+ mentions |
Nencki-Monash template (RRID:SCR_018367) | NM template | data set, data or information resource | Open access template of young adult marmoset brain, created from three dimensional reconstructions. Histology based average template of marmoset cortex with probabilistic localization of cytoarchitectural areas. Allows direct estimates of most likely coordinates of each cortical area, as well as quantification of margins of error involved in assigning voxels to areas, and preserves quantitative information about laminar structure of cortex.Enables integration with magnetic resonance imaging and tracer based connectivity data. Allows interoperability between NM template and other current digital atlases of marmoset cortex. | Marmoset cortex, young adult marmoset brain, marmoset brain, histology, 3D image, probabilistic localization, cytoarchitectural area, estimate coordiante, cortical area, error quantification, voxel assigning, cortex laminar structure, MRI imaging integration, data interoperability, digital atlas, data, data set | works with: Marmoset Brain Connectivity Atlas | International Neuroinformatics Coordinating Facility ; National Centre for Research and Development ; Australian Research Council ; National Health and Medical Research Council |
DOI:10.1101/2020.04.10.036632 | Free, Available for download, Freely available | SCR_018367 | Nencki-Monash template of Common Marmoset cortex, Nencki Monash template of common Marmoset cortex, Nencki Monash template | 2026-02-16 09:49:29 | 3 | ||||||
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SRplot Resource Report Resource Website 10+ mentions |
SRplot (RRID:SCR_025904) | data access protocol, software resource, web service | Web server that integrated data visualization and graphing functions together. Can be run easily with all Web browsers, with user-friendly graphical interface, users can paste your data directly into input box according to defined file format. Resulting graphs can be downloaded in bitmap (PNG or TIFF) or vector (PDF or SVG) format in publication quality. Used for data visualization and graphing. | data visualization and graphing, graphs, data, visualization, | Natural Science Foundation of Hunan Province | PMID:37943830 | Free, Freely available, | SCR_025904 | 2026-02-16 09:51:03 | 49 | |||||||||
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statista Resource Report Resource Website 10+ mentions |
statista (RRID:SCR_026121) | web application, software resource, data or information resource | Platform for data and statistics. Website provides data-driven services, collection of statistics, reports, and insights on over 80,000 topics. | data, statistics, collection of statistics, reports, | Restricted | SCR_026121 | 2026-02-16 09:51:05 | 14 | |||||||||||
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Mammal Diversity Database Resource Report Resource Website 1+ mentions |
Mammal Diversity Database (RRID:SCR_026173) | database, data or information resource | Updatable online database of mammal taxonomic and biodiversity information hosted by American Society of Mammalogists. Provides information on species-level and higher taxonomic changes, thereby promoting more rigorous study of mammalian biodiversity worldwide. The initial objective has been to aggregate, curate, and compile, new citations on species descriptions and taxonomic revisions into regular releases that are downloadable in comma-delimited format. Downstream goals include expanded hosting of ecological, trait, and taxonomic data. | American Society of Mammalogists, mammal, taxonomic, biodiversity, information, ecological, trait, taxonomic, data | Free, Freely available, | https://zenodo.org/records/4139818 | SCR_026173 | 2026-02-16 09:51:06 | 2 | ||||||||||
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rnaseq Resource Report Resource Website 10+ mentions |
rnaseq (RRID:SCR_026973) | software toolkit, source code, software resource | Software RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control. Can be used to analyse RNA sequencing data obtained from organisms with reference genome and annotation. It takes a samplesheet and FASTQ files as input, performs quality control (QC), trimming and (pseudo-)alignment, and produces a gene expression matrix QC report. | RNA sequencing, sequencing analysis, organisms, data, reference genome, annotation, | Free, Available for download, Freely available | SCR_026973 | nf-core/rnaseq | 2026-02-16 09:51:17 | 20 | ||||||||||
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Cultivarium Resource Report Resource Website |
Cultivarium (RRID:SCR_027163) | portal, data or information resource, organism-related portal, topical portal | Cultivarium creates tools for life scientists to expand access to novel microorganisms, inspire new research avenues, and push the frontiers of biotechnology. Aggregates information, data, and publications for bacteria, fungi, archaea, and protists. | information, data, publications, bacteria, fungi, archaea, protists | Free, Freely available | SCR_027163 | 2026-02-16 09:51:19 | 0 | |||||||||||
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National Neighborhood Data Archive Resource Report Resource Website |
National Neighborhood Data Archive (RRID:SCR_027451) | service resource, data repository, storage service resource | Open data repository to facilitate research on the relationship between neighborhoods and health, especially within the context of large federally funded surveys and cohort studies. Used to explore topics of interest to neighborhoods and communities. NaNDA measures can be readily linked to survey data, cohort studies, electronic medical records, or other microdata, via geographic identifiers, or combined and explored on their own. NaNDA datasets are created by researchers in the Social Environment and Health program at the University of Michigan Institute for Social Research. | data archive, physical, economic, demographic, social environment, spatial scale, data | is related to: University of Michigan; Ann Arbor; USA | NIMHD U01NR020556; NIDILRR 90RTHF0001 |
Free, Freely available | SCR_027451 | 2026-02-16 09:51:23 | 0 |
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