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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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FASTER Resource Report Resource Website 100+ mentions |
FASTER (RRID:SCR_009045) | FASTER | software application, software resource | Software application to reduce family members so the families can be used in GENEHUNTER program. FASTER eliminates the most redundant individuals according to the set of weights (preferences) (Age, Information about genetic Markers, etc.) The program has several features such as automatical reducement of branches without any affected individuals, etc. (entry from Genetic Analysis Software) | gene, genetic, genomic, ms-windows, (9x/me/2000/xp) | is listed by: Genetic Analysis Software | nlx_154020 | SCR_009045 | FAmily SmarT EliminatoR | 2026-02-15 09:20:02 | 341 | ||||||||
|
MULTIQTL Resource Report Resource Website 50+ mentions |
MULTIQTL (RRID:SCR_009043) | MULTIQTL | software application, software resource | Software application that integrates a broad spectrum of data mining, statistical analysis, interactive visualization and modeling tools that allow QTL analysis based on advanced and sophisticated methods for maximum extraction of the mapping information from data. (entry from Genetic Analysis Software) | gene, genetic, genomic | is listed by: Genetic Analysis Software | nlx_154016 | SCR_009043 | 2026-02-15 09:19:37 | 52 | |||||||||
|
SPERMSEG Resource Report Resource Website |
SPERMSEG (RRID:SCR_009044) | SPERMSEG | software application, software resource | Software application for analysis of segregation in single-sperm data (entry from Genetic Analysis Software) | gene, genetic, genomic, c | is listed by: Genetic Analysis Software | nlx_154017 | SCR_009044 | 2026-02-15 09:20:01 | 0 | |||||||||
|
ALLASS Resource Report Resource Website |
ALLASS (RRID:SCR_009040) | ALLASS | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, c, unix, sun | is listed by: Genetic Analysis Software | nlx_154005 | SCR_009040 | 2026-02-15 09:20:01 | 0 | |||||||||
|
PEDJAVA Resource Report Resource Website |
PEDJAVA (RRID:SCR_008429) | PEDJAVA | software application, software resource | Software application that allows pedigree entry and retrieval from an internet browser into a distant MS ACCESS database. Includes IP access restriction, automatic numbering of families and individuals and database consistency checks. (entry from Genetic Analysis Software) | gene, genetic, genomic, jdk, no restriction for client, server win 95/nt | is listed by: Genetic Analysis Software | nlx_154522 | SCR_008429 | PedJava | 2026-02-15 09:19:49 | 0 | ||||||||
|
GASP Resource Report Resource Website 100+ mentions |
GASP (RRID:SCR_008703) | GASP | software application, software resource | Software tool for testing and investigating methods in statistical genetics by generating samples of family data based on user specified models. (entry from Genetic Analysis Software), THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, genomic, fortran77, unix, dec-unix 4.0b, solaris 2.5, sgi-irix 6.2 | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154313 | SCR_008703 | Genometric Analysis Simulation Program | 2026-02-15 09:19:33 | 122 | |||||||
|
ETDT Resource Report Resource Website 1+ mentions |
ETDT (RRID:SCR_007576) | ETDT | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 5th,2023. Software application for TDT test on markers with more than two alleles using a logistic regression analysis. (entry from Genetic Analysis Software). | gene, genetic, genomic, c, ms-dos | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154303 | SCR_007576 | extended transmission/disequilibrium test | 2026-02-15 09:19:26 | 2 | |||||||
|
Comparative Biomedical Sciences Graduate Program Resource Report Resource Website 1+ mentions |
Comparative Biomedical Sciences Graduate Program (RRID:SCR_008304) | training resource, postdoctoral program resource | The Comparative Biomedical Sciences Graduate Degree program provides exceptional graduate research training in core areas of animal and human health including genomics, immunology, molecular and cellular biology, physiology, infectious disease, neuroscience, pharmacology and toxicology, and oncology. Seventy-five faculty members in a diverse number of UW departments including Bacteriology, Biochemistry, Medical Microbiology and Immunology, Medicine, Oncology, Pathology, Radiology in addition to the 4 departments of the School of Veterinary Medicine are trainers in the program. These internationally recognized professors, as well as the integrative nature of our program, provide outstanding and unique research opportunities for our students. Because the University of Wisconsin is consistently ranked as one of the best 10 graduate institutions in the nation, the strength of our program is not only due to the superb research and teaching of our faculty but also due to the University as a whole. Approximately 55 students, most of whom are Ph.D. candidates, are currently enrolled in the program. Research strategies and academic curricula are tailored to the specific needs of each individual student. Graduates from our program are highly successful in the biotechnology industry and at top-ranked research institutions in the U.S. and abroad. The Comparative Biomedical Sciences Graduate Program offers a diverse number of research opportunities in multiple fields of study. A brief description of some of the major areas of research being performed by faculty affiliated with the Comparative Biomedical Sciences Graduate Program is provided below. Use the pull down menu above or click on the heading to find faculty members doing research in these areas. Sponsors: CBMS is supported by the University of Wisconsin | animal, biology, biomedical, cellular, comparative, disease, genomic, health, human, immunology, infectious, medicine, microbiology, molecular, neuroscience, oncology, pharmacology, physiology, radiology, science, toxicology | has parent organization: University of Wisconsin-Madison; Wisconsin; USA | nif-0000-24383 | http://www.vetmed.wisc.edu/pbs/gradprogram/index.shtml | SCR_008304 | CBMS | 2026-02-15 09:19:46 | 2 | ||||||||
|
TRANSMIT Resource Report Resource Website 50+ mentions |
TRANSMIT (RRID:SCR_007571) | TRANSMIT | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 12,2023. Software application that tests for association between genetic marker and disease by examining the transmission of markers from parents to affected offspring. The main features which differ from other similar programs are: (1) It can deal with transmission of multi-locus haplotypes, even if phase is unknown, and (2) Parental genotypes may be unknown. (entry from Genetic Analysis Software) | gene, genetic, genomic, c++, unix | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154100 | SCR_007571 | 2026-02-15 09:19:46 | 50 | ||||||||
|
ASPEX Resource Report Resource Website 1+ mentions |
ASPEX (RRID:SCR_008414) | ASPEX | software application, software resource | A set of programs for performing multipoint exclusion mapping of affected sibling pair data for discrete traits. (entry from Genetic Analysis Software) | gene, genetic, genomic, c, tcl, perl, (the graphic script requires xmgr, available from ftp://ftp.teleport.com/pub/users/pturner/acegr), unix, (solaris/sunos/irix/osf-1), linux, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
nlx_154234, biotools:aspex | https://bio.tools/aspex | SCR_008414 | Affected Sib Pairs EXclusion map | 2026-02-15 09:19:49 | 9 | |||||||
|
GENEHUNTER++SAD Resource Report Resource Website |
GENEHUNTER++SAD (RRID:SCR_008777) | GENEHUNTER++SAD | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 12,2023. Software application with implementation of the Sad statistic, more robust to transmission ratio distortion in the context of allele sharing (entry from Genetic Analysis Software) | gene, genetic, genomic | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154335 | SCR_008777 | 2026-02-15 09:19:53 | 0 | ||||||||
|
MAPMAKER/SIBS Resource Report Resource Website 1+ mentions |
MAPMAKER/SIBS (RRID:SCR_008012) | MAPMAKER/SIBS | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. Data analysis software for complete multipoint analysis. | gene, genetic, genomic, c, unix | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154465 | https://dsgweb.wustl.edu/aldi/software/manuals/mapmaker_sibs/mapmaker_sibs.pdf | ftp://ftp-genome.wi.mit.edu/distribution/software/sibs | SCR_008012 | GENEHUNTER | 2026-02-15 09:19:47 | 6 | |||||
|
TLINKAGE Resource Report Resource Website |
TLINKAGE (RRID:SCR_008838) | TLINKAGE | software application, software resource | Software programs that are extensions of the LINKAGE programs that allow the disease phenotype to be under the control of disease two loci. (entry from Genetic Analysis Software) | gene, genetic, genomic, pascal, ms-dos | is listed by: Genetic Analysis Software | nlx_154672 | SCR_008838 | two-locus trait linkage programs | 2026-02-15 09:19:57 | 0 | ||||||||
|
TRAP Resource Report Resource Website 100+ mentions |
TRAP (RRID:SCR_009002) | TRAP | software application, software resource | Software tool for determining a regression model of quantitative or binary trait variation when the number of possible genetic predictors is very large, considering only a moderate number of predictors at one time, using unrelated or family data. (entry from Genetic Analysis Software) | gene, genetic, genomic, r, any with r installation | is listed by: Genetic Analysis Software | nlx_154010 | SCR_009002 | Tiled Regression Analysis Package | 2026-02-15 09:20:01 | 394 | ||||||||
|
MGA-MAPF2 Resource Report Resource Website |
MGA-MAPF2 (RRID:SCR_008108) | MGA-MAPF2 | software application, software resource | Software application that map QTLs in F-2 intercross in model organisms (entry from Genetic Analysis Software) | gene, genetic, genomic, fortran, ms-dos, ms-windows, (95/98/nt) | is listed by: Genetic Analysis Software | nlx_154478 | SCR_008108 | 2026-02-15 09:19:48 | 0 | |||||||||
|
ILR Resource Report Resource Website |
ILR (RRID:SCR_007895) | ILR | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 5th,2023. Software application for calculation of the restricted likelihood-ratio affected sib-pair test for linkage allowing for imprinting (entry from Genetic Analysis Software) | gene, genetic, genomic, sas macro | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | SCR_007895 | Imprinting Likelihood Ratio | 2026-02-15 09:19:40 | 0 | ||||||||
|
2SNP Resource Report Resource Website 1+ mentions |
2SNP (RRID:SCR_009038) | 2SNP | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. An algorithm resource for scalable phasing method for trios and unrelated individuals. | gene, genetic, genomic | is listed by: Genetic Analysis Software | PMID:18451440 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154003 | https://omictools.com/2snp-tool | http://alla.cs.gsu.edu/~software/2SNP/ | SCR_009038 | 2026-02-15 09:19:56 | 2 | |||||
|
AGEINF Resource Report Resource Website |
AGEINF (RRID:SCR_009039) | AGEINF | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. Software application used to infer the age of a rare, selectively-neutral mutation. | gene, genetic, genomic, c | is listed by: Genetic Analysis Software | Aging | PMID:10978301 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154004 | http://www.math.sfu.ca/~jgraham/Papers/Programs/AgeCode/ | SCR_009039 | 2026-02-15 09:19:37 | 0 | |||||
|
ALBERT Resource Report Resource Website 10+ mentions |
ALBERT (RRID:SCR_009037) | ALBERT | software application, software resource | Software application that estimates genotype relative risks, genotyping error rates and population risk allele frequencies from marker genotype data in case-parent trios. ALBERT uses the distribution of trio marker genotypes to compute maximum likelihood estimates for the parameters. (entry from Genetic Analysis Software) | gene, genetic, genomic, c, unix, linux, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
biotools:albert, nlx_154002 | https://bio.tools/albert | SCR_009037 | A Likelihood Based Estimation of Risk in Trios | 2026-02-15 09:20:01 | 47 | |||||||
|
MAP MANAGER QT Resource Report Resource Website |
MAP MANAGER QT (RRID:SCR_008101) | MAP MANAGER QT | software application, software resource | A graphic, interactive program to map quantitative trait loci by regression methods; MAP MANAGER CLASSIC enhanced by quantitative trait mapping. (entry from Genetic Analysis Software) | gene, genetic, genomic, pascal, macos | is listed by: Genetic Analysis Software | nlx_154466 | SCR_008101 | 2026-02-15 09:19:28 | 0 |
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