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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
S Resource Report Resource Website |
S (RRID:SCR_007646) | S | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017. Software application (entry from Genetic Analysis Software) | gene, genetic, genomic | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154605 | SCR_007646 | 2026-02-12 09:44:35 | 0 | ||||||||
|
LDA Resource Report Resource Website |
LDA (RRID:SCR_007527) | LDA | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. A Java program for analyzing the pairwise linkage disequilibrium. | gene, genetic, genomic, java, ms-windows, linux, macos | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154088 | SCR_007527 | Linkage Disequilibrium Analyzer | 2026-02-12 09:44:35 | 0 | |||||||
|
SNPHAP Resource Report Resource Website 10+ mentions |
SNPHAP (RRID:SCR_008456) | SNPHAP | software application, software resource | Software program for estimating frequencies of haplotypes of large numbers of diallelic markers from unphased genotype data from unrelated subjects (entry from Genetic Analysis Software) | gene, genetic, genomic, c, c++ | is listed by: Genetic Analysis Software | nlx_154642 | SCR_008456 | 2026-02-12 09:44:49 | 30 | |||||||||
|
SIMCOAL Resource Report Resource Website 1+ mentions |
SIMCOAL (RRID:SCR_008450) | SIMCOAL | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, c++, ms-windows, (9x/nt) | is listed by: Genetic Analysis Software | nlx_154620 | SCR_008450 | SIMulate COAlescence | 2026-02-12 09:44:37 | 8 | ||||||||
|
RVTESTS Resource Report Resource Website 50+ mentions |
RVTESTS (RRID:SCR_007639) | RVTESTS | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, c++ | is listed by: Genetic Analysis Software | nlx_154603 | SCR_007639 | Rare Variants TESTS | 2026-02-12 09:44:33 | 86 | ||||||||
|
HAPLO 1 Resource Report Resource Website |
HAPLO 1 (RRID:SCR_009058) | HAPLO 1 | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 16,2023. Software application that assigns each person the haplotype with the highest conditional probability using Elston-Stewart algorithm (entry from Genetic Analysis Software) | gene, genetic, genomic, fortran 77, (ansi standard), unix, sunos, solaris, hp | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154039 | SCR_009058 | Haplotyping with computation of conditional probabilities | 2026-02-12 09:44:47 | 0 | |||||||
|
SCOUT Resource Report Resource Website 10+ mentions |
SCOUT (RRID:SCR_009054) | SCOUT | software application, software resource | Software program for conducting combined association analysis of triads and unrelated subjects (entry from Genetic Analysis Software) | gene, genetic, genomic, fortran (cvf 6.6) with imsl routines, ms-windows, (2000/xp) | is listed by: Genetic Analysis Software | nlx_154034 | SCR_009054 | 2026-02-12 09:44:46 | 40 | |||||||||
|
HAPLOREC Resource Report Resource Website 1+ mentions |
HAPLOREC (RRID:SCR_009055) | HAPLOREC | software application, software resource | Software application for population-based haplotyping (entry from Genetic Analysis Software) | gene, genetic, genomic | is listed by: Genetic Analysis Software | nlx_154036 | SCR_009055 | 2026-02-12 09:44:45 | 4 | |||||||||
|
SEGPATH Resource Report Resource Website 1+ mentions |
SEGPATH (RRID:SCR_009052) | SEGPATH | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented September 29, 2016. Software for segregation and pathway analysis. | gene, genetic, genomic | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154030 | http://www.biostat.wustl.edu/~mike/segpath/ | SCR_009052 | SEGregation analysis and PATH analysis | 2026-02-12 09:44:47 | 2 | ||||||
|
KIN Resource Report Resource Website |
KIN (RRID:SCR_009047) | KIN | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented September 29, 2016. Software application to calculate kinship coefficient or coefficient of coancestry (the probability that alleles at a given locus are identical by descent). | gene, genetic, genomic, ms-dos | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154022 | http://gnome.agrenv.mcgill.ca/tinker/kin.htm | SCR_009047 | 2026-02-12 09:44:44 | 0 | |||||||
|
FASTER Resource Report Resource Website 100+ mentions |
FASTER (RRID:SCR_009045) | FASTER | software application, software resource | Software application to reduce family members so the families can be used in GENEHUNTER program. FASTER eliminates the most redundant individuals according to the set of weights (preferences) (Age, Information about genetic Markers, etc.) The program has several features such as automatical reducement of branches without any affected individuals, etc. (entry from Genetic Analysis Software) | gene, genetic, genomic, ms-windows, (9x/me/2000/xp) | is listed by: Genetic Analysis Software | nlx_154020 | SCR_009045 | FAmily SmarT EliminatoR | 2026-02-12 09:44:46 | 341 | ||||||||
|
MULTIQTL Resource Report Resource Website 50+ mentions |
MULTIQTL (RRID:SCR_009043) | MULTIQTL | software application, software resource | Software application that integrates a broad spectrum of data mining, statistical analysis, interactive visualization and modeling tools that allow QTL analysis based on advanced and sophisticated methods for maximum extraction of the mapping information from data. (entry from Genetic Analysis Software) | gene, genetic, genomic | is listed by: Genetic Analysis Software | nlx_154016 | SCR_009043 | 2026-02-12 09:44:47 | 52 | |||||||||
|
SPERMSEG Resource Report Resource Website |
SPERMSEG (RRID:SCR_009044) | SPERMSEG | software application, software resource | Software application for analysis of segregation in single-sperm data (entry from Genetic Analysis Software) | gene, genetic, genomic, c | is listed by: Genetic Analysis Software | nlx_154017 | SCR_009044 | 2026-02-12 09:44:56 | 0 | |||||||||
|
ALLASS Resource Report Resource Website |
ALLASS (RRID:SCR_009040) | ALLASS | software application, software resource | Software application (entry from Genetic Analysis Software) | gene, genetic, genomic, c, unix, sun | is listed by: Genetic Analysis Software | nlx_154005 | SCR_009040 | 2026-02-12 09:44:56 | 0 | |||||||||
|
ALOHOMORA Resource Report Resource Website 1+ mentions |
ALOHOMORA (RRID:SCR_009117) | ALOHOMORA | software application, software resource | Software application designed to facilitate genome-wide linkage studies performed with high-density single nucleotide polymorphism (SNP) marker panels such as the Affymetrix GeneChip(R) Human Mapping 10K Array. (entry from Genetic Analysis Software) | gene, genetic, genomic, perl, ms-window, linux, unix, solaris, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
nlx_154219, biotools:alohomora | https://bio.tools/alohomora | SCR_009117 | 2026-02-12 09:44:57 | 8 | ||||||||
|
ALP Resource Report Resource Website |
ALP (RRID:SCR_009118) | ALP | software application, software resource | Microsoft Windows application designed to analyze microsatellite DNA fragments separated on an Automated Laser Fluorescence sequencer. (entry from Genetic Analysis Software) | gene, genetic, genomic, c, ms-windows, (3.1/95/nt) | is listed by: Genetic Analysis Software | nlx_154220 | SCR_009118 | Automated Linkage Preprocessor | 2026-02-12 09:44:48 | 0 | ||||||||
|
SIMULAPLOT Resource Report Resource Website |
SIMULAPLOT (RRID:SCR_009079) | SIMULAPLOT | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. A tool designed to help visualize the joint effect of genes and continuous environmental covariates on complex human disease simulation models. | gene, genetic, genomic, r | is listed by: Genetic Analysis Software | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154089 | http://www.chg.duke.edu/research/simlaplot.html | SCR_009079 | 2026-02-12 09:44:45 | 0 | |||||||
|
TUNA Resource Report Resource Website 1+ mentions |
TUNA (RRID:SCR_009112) | TUNA | software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented September 22, 2016. Free software package for estimating allele frequencies for all the SNPs available in a population reference panel (e.g. HapMap data base) based on genotype data from a subset of markers (e.g. the Illumina HumanHap300 BeadChip SNP set) in a group of subjects (e.g. the cases in a case-control sample)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, genomic | is listed by: Genetic Analysis Software | PMID:18057020 | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154211 | SCR_009112 | Testing UNtyped Alleles | 2026-02-12 09:44:48 | 2 | ||||||
|
CASPAR Resource Report Resource Website 50+ mentions |
CASPAR (RRID:SCR_009074) | CASPAR | software application, software resource | Software application who''s main novel feature is conditional linkage analyses, in which the population can be subdivided according to criteria at some loci and analyzed for linkage at other loci. CASPAR uses simulation to overcome the problems inherent in such multiple testing. (entry from Genetic Analysis Software) | gene, genetic, genomic, c, unix, bio.tools |
is listed by: Genetic Analysis Software is listed by: bio.tools is listed by: Debian |
biotools:caspar, nlx_154071 | https://bio.tools/caspar | SCR_009074 | Computerized Affected Sibling Pair Analyzer and Reporter | 2026-02-12 09:44:47 | 52 | |||||||
|
WEBQTL Resource Report Resource Website 10+ mentions |
WEBQTL (RRID:SCR_009072) | WEBQTL | software application, software resource | An interactive web site useful for exploring the genetic modulation of thousands of phenotypes gathered over a 30-year period by hundreds of investigators using reference panels of recombinant inbred strains of mice. WebQTL includes dense error-checked genetic maps, as well as extensive gene expression data sets (Affymetrix) acquired across more than 35 strains of mice. WebQTL accepts user-entered traits for BXD, AXB/BXA, CXB, BXH, AKXD recombinant inbred strains. (entry from Genetic Analysis Software) | gene, genetic, genomic, c++, and, python, all via internet | is listed by: Genetic Analysis Software | nlx_154066 | http://www.webqtl.org/search.html | SCR_009072 | 2026-02-12 09:44:47 | 46 |
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