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http://www.vsni.co.uk/products/genstat/
A statistical software which can be used for basic statistics, experimental design, sample size calculations, and analysis of linear mixed models, time series, and spatial analysis.
Proper citation: GenStat (RRID:SCR_014595) Copy
A public–private initiative that supports research that provides evidence on the biological validity of therapeutic targets and that gain insight into the effectiveness of pharmacological intervention. It aims to provide a research and development framework that applies human disease. It shares its information openly.
Proper citation: Open Targets (RRID:SCR_014622) Copy
A non-profit organization that awards grants to a broad spectrum of charities, including those that benefit spinal cord injury efforts. The Foundation is primarily dedicated to funding extensive research, education and quality of life programs for improving the lives of people affected by spinal cord injury.
Proper citation: CRAIG H. NEILSEN FOUNDATION (RRID:SCR_014552) Copy
http://enigma.ini.usc.edu/protocols/dti-protocols/
Pipeline which provides tools to extract whole-brain average and regional measurements from DTI images including FA, AD, RD and MD. Protocols for preprocessing, ENIGMA-DTI processing (skeletonization and ROI extraction), and GWAS analysis are available. Software tools used for each process are listed within the protocols.
Proper citation: ENIGMA-DTI Pipeline (RRID:SCR_014649) Copy
Supplier and servicer of products for expression studies in Xenopus laevis oocytes. Products include overnight delivery of freshly prepared Xenopus laevis oocytes, Cell & Tissue Media necessary during preparation, maintenance, and recording of Xenopus oocytes and lab chemicals. Services for pharmacological studies include heterologous expression and in vitro electrophysiology.
Proper citation: EcoCyte Bioscience (RRID:SCR_014773) Copy
Commercial ogranization which provides molecular and drug discovery software and services to researchers. American software company that develops chemical simulation software for use in pharmaceutical, biotechnology, and materials science research. Provides products ranging from general molecular modeling programs to a full suite of chemical simulation and drug design software, including ligand- and structure-based methods.
Proper citation: Schrodinger (RRID:SCR_014879) Copy
http://www.eyesopen.com/oedocking
Complementary OEDocking tool for virtual screening, it performs a systematic and non-stochastic examination of all possible protein-ligand poses. The software also filters for shape complementarity and chemical feature alignment before selecting and optimizing protein-ligand poses.
Proper citation: FRED - Fast exhaustive docking (RRID:SCR_014885) Copy
Institute dedicated to research in immunology by utilizing the academic and research communities in the La Jolla area as well as technological advances in biomedical research, imaging and analysis. Specific topics include autoimmune disease, cancer, allergies, infectious diseases and inflammation.
Proper citation: La Jolla Institute for Immunology (RRID:SCR_014845) Copy
A public research university in Colchester, Essex, England. The institution has degree programs that span the humanities, social sciences, and health.
Proper citation: University of Essex; England; United Kingdom (RRID:SCR_014725) Copy
Brain research group affiliated with the Nanjing University of Aeronautics and Astronautics (NUAA) in China. The main research interests of iBRAIN include developing methods in machine learning, data mining, neural computation, and related areas for decoding brain functions or recognizing brain disease. Research related code and datasets can be found on the main site.
Proper citation: iBRAIN (RRID:SCR_014691) Copy
http://www.adaptivebiotech.com
Commercial organization which combines high-throughput sequencing and bioinformatics to profile T-cell and B-cell receptors.
Proper citation: Adaptive Biotechnologies (RRID:SCR_014709) Copy
http://www.compudrug.com/toxalert
Software tool for high-throughput toxicity prediction; it assists in the early and quick identification of toxic drug candidates. ToxAlert provides probability percentages for different toxicity endpoints such as oncogenicity, mutagenicity, teratogenicity, neurotoxicity or cell toxicity.
Proper citation: ToxAlert (RRID:SCR_014907) Copy
https://www.thermofisher.com/order/catalog/product/IQLAAEGAAPFADBMBCX
Mass spectrometer that combines quadrupole, ion trap, and Orbitrap mass analysis.
Proper citation: LTQ-Orbitrap Fusion Tribrid Mass Spectrometer (RRID:SCR_014992) Copy
https://www.nikoninstruments.com/en_EU/Products/Upright-Microscopes/Research/Eclipse-FN1
Fixed-stage microscope for electrophysiological research. Features include open design, noise reduction, 16x objective lens, and water dipping objective with depth induced aberration correction.
Proper citation: Nikon Eclipse FN1 Microscope (RRID:SCR_014995) Copy
https://www.agilent.com/cs/library/datasheets/Public/5991-2541EN.pdf
Hardware system which automates RNA, DNA, and protein sample QC, including sample loading, separation, and imaging.
Proper citation: 2200 TapeStation Instrument (RRID:SCR_014994) Copy
Regional commission of the United Nations with the purpose of contributing to the economic development of Latin America, coordinating actions directed towards this end, reinforcing economic ties among countries and with other nations, and promoting social development.
Proper citation: Economic Commission for Latin America and the Caribbean (RRID:SCR_014998) Copy
http://www.multicase.com/meta-pc
Software program to predict metabolic and degradation products of chemicals. METAPC has dictionaries on mammalian metabolism, aerobic microbial degredation, anerobic microbial degredation, and photo degredation.
Proper citation: METAPC (RRID:SCR_014916) Copy
https://support.illumina.com/sequencing/sequencing_software/bcl2fastq-conversion-software.html
Conversion software that both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis.
Proper citation: bcl2fastq (RRID:SCR_015058) Copy
Foundation for improving the quality of life for people affected by OI through treatment and cure research, education, awareness, and mutual support. OIF lists personal resources for individuals affected by osteogenesis imperfecta as well as professional and clinical resources for researchers.
Proper citation: Osteogenesis Imperfecta Foundation (RRID:SCR_015034) Copy
https://www.cdc.gov/labstandards/index.html
Standardization program which helps assure the quality of laboratory test data and results so patients, healthcare providers, researchers, and public health officials can be confident that laboratory test results they receive are accurate. CDC services include reference materials, proficiency testing, training, guideline creation, and consultations. Quality assurance and standardization programs can be can be customized by and for users and laboratories.
Proper citation: CDC Laboratory Quality Assurance and Standardization Programs (RRID:SCR_015000) Copy
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