Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
http://pipmaker.bx.psu.edu/pipmaker/
PipMaker computes alignments of similar regions in two DNA sequences. Moreover, MultiPipMaker can be requested to compute a true multiple alignment of the input sequences and return a nucleotide-level view of the results.
Proper citation: PipMaker and MultiPipMaker (RRID:SCR_011806) Copy
A generic sequence comparison tool for visualizing genome alignments both within and between species.
Proper citation: SynBrowse (RRID:SCR_011807) Copy
Swedish agency whose mission is to promote sustainable growth by improving the conditions for innovation, as well as funding needs-driven research. They promote collaborations between companies, universities, research institutes and the public sector by stimulating a greater use of research, by making long-term investment in strong research and innovation environments and by developing catalytic meeting places. Their activities also focus on strengthening international cooperation.
Proper citation: VINNOVA (RRID:SCR_011765) Copy
State supported college of two states, Virginia and Maryland, filling the need for veterinary medicine education in both states. Students from both states are considered "in-state" students for admissions purposes.
Proper citation: Virginia-Maryland Regional College of Veterinary Medicine; Virginia; USA (RRID:SCR_011766) Copy
Dutch and English speaking research university located in Brussels, Belgium. It has four campuses: Brussels Humanities, Science and Engineering Campus, Brussels Health Campus, Brussels Technology Campus and Brussels Photonics Campus.
Proper citation: Vrije Universiteit Brussel; Brussels; Belgium (RRID:SCR_011769) Copy
VU University; Amsterdam; Netherlands
Proper citation: VU University; Amsterdam; Netherlands (RRID:SCR_011770) Copy
Medical research institute in Australia that researches and develops treatments for cancer, infectious diseases and chronic inflammatory diseases.
Proper citation: Walter and Eliza Hall Institute of Medical Research; Victoria; Australia (RRID:SCR_011773) Copy
Public research university in Columbia, South Carolina. It has seven satellite campuses throughout the state.
Proper citation: University of South Carolina; South Carolina; USA (RRID:SCR_011699) Copy
Public research university in Greater Victoria, British Columbia, Canada, located in the municipalities of Oak Bay and Saanich. The university traces its roots to Victoria College, the first post-secondary institution established in the province.
Proper citation: University of Victoria; British Columbia; Canada (RRID:SCR_011740) Copy
University of Washington is public research university in Seattle, Washington. Has university campuses in Seattle, Tacoma and Bothell, academic medical center and professional and continuing education programs.
Proper citation: University of Washington; Seattle; USA (RRID:SCR_011749) Copy
The university of Virginia opened in 1819.
Proper citation: University of Virginia; Virginia; USA (RRID:SCR_011743) Copy
Confederal university based in Cardiff, Wales. Founded by Royal Charter in 1893 as a federal university with three constituent colleges – Aberystwyth, Bangor and Cardiff – the university was the first and oldest university in Wales, one of the four countries in the United Kingdom.
Proper citation: University of Wales; Wales; United Kingdom (RRID:SCR_011746) Copy
Public research university in Arlington, Texas, midway between Dallas and Fort Worth.
Proper citation: University of Texas at Arlington; Texas; USA (RRID:SCR_011716) Copy
http://code.google.com/p/condetri/
Software tool as content dependent read trimmer for Illumina data. Content dependent read trimming software for Illumina/Solexa sequencing data.
Proper citation: ConDeTri (RRID:SCR_011838) Copy
UTEP officially opened in the fall of 1914 and is the second oldest institution in The University of Texas System.
Proper citation: University of Texas at El Paso (RRID:SCR_011718) Copy
http://www.cbcb.umd.edu/software/quake/
A software package to correct substitution sequencing errors in experiments with deep coverage (e.g. >15X), specifically intended for Illumina sequencing reads.
Proper citation: Quake (RRID:SCR_011839) Copy
Public research university in San Antonio, Texas.
Proper citation: University of Texas at San Antonio; Texas; USA (RRID:SCR_011719) Copy
Software providing a framework for collecting, storing, and accessing data produced by a wide variety of experiments.
Proper citation: SBEAMS (RRID:SCR_011830) Copy
A software package for visualizing data and information. It visualizes data in a circular layout - this makes Circos ideal for exploring relationships between objects or positions.
Proper citation: Circos (RRID:SCR_011798) Copy
http://www.bioinformatics.babraham.ac.uk/projects/sierra/
Web based Laboratory Information Management System (LIMS) system which can be used to track samples and distribute results within small sequencing facility. Provides simple way to track samples within facility and return sequencing, mapping and QC results to users.
Proper citation: Babraham Sierra (RRID:SCR_011831) Copy
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within NIF that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
