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http://www.uniklinikum-saarland.de/einrichtungen/fachrichtungen/humangenetik/software/
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. A software tool for predicting granzyme B and caspase cleavage sites.
Proper citation: GraBCas (RRID:SCR_000205) Copy
THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. A software package for the prediction of calpain cleavage sites.
Proper citation: GPS-Calpain Cleavage Detector (RRID:SCR_000202) Copy
Provides digital infrastructure capabilities for research and innovation across Queensland and Australia. Provides services, infrastructure and support for computation and data driven collaborative research and its application in industry. Members are six Queensland universities – The University of Queensland, Queensland University of Technology, Griffith University, James Cook University, CQUniversity, and the University of Southern Queensland. The University of the Sunshine Coast is an associate member. Member employees provide support and development services.
Proper citation: Queensland Cyber Infrastructure Foundation Ltd (RRID:SCR_000208) Copy
Research foundation that funds research to develop new treatments for multiple myeloma, an incurable blood cancer.
Proper citation: Multiple Myeloma Research Foundation (RRID:SCR_000207) Copy
A public university in Ohio with land, sea and space grants that offers degree programs and research at the undergraduate and graduate level.
Proper citation: Ohio Northern University; Ohio; USA (RRID:SCR_000362) Copy
http://ribopicker.sourceforge.net/
Software to automatically identify and efficiently remove rRNA-like sequences from metatranscriptomic and metagenomic datasets.
Proper citation: riboPicker (RRID:SCR_000360) Copy
A software for genome assembly, and is specifically designed to analyze long Sanger-chemistry reads.
Proper citation: ARACHNE (RRID:SCR_000351) Copy
http://parsecnv.sourceforge.net/
Software that takes CNV calls as input and creates SNP based statistics for CNV occurrence in cases and controls then calls CNVRs based on neighboring SNPs of similar significance.
Proper citation: ParseCNV (RRID:SCR_000355) Copy
http://sourceforge.net/projects/kinannote/
Software that identifies and classifies protein kinases in a user-provided fasta file using an HMM derived from serine / threonine protein kinases, a position specific scoring matrix derived from the HMM, and comparison with a local version of the curated kinase database from kinase.com.
Proper citation: Kinannote (RRID:SCR_000352) Copy
http://www.scienceexchange.com/facilities/genomics-services-lab
A lab that offers genetic research tools such as RNA sequencing and a variety of arrays.
Proper citation: HudsonAlpha Genomics Services Lab (RRID:SCR_000353) Copy
http://sourceforge.net/projects/jnomics/
A collection of cloud-scale DNA sequence analysis tools.
Proper citation: Jnomics (RRID:SCR_000348) Copy
A genome browser framework which gives an open browsing experience, open data access, collaborative work support, and a framework to import annotations. Multiple data access approaches are supported for external platforms to retrieve data from ABrowse. This resource also contains an online user-space in which users can create, store and share comments, annotations and landmarks.
Proper citation: ABrowse (RRID:SCR_000345) Copy
http://icbi.at/software/gpviz/gpviz.shtml
A versatile Java-based software used for dynamic gene-centered visualization of genomic regions and/or variants.
Proper citation: GPViz (RRID:SCR_000346) Copy
https://sunnylab.wordpress.com/about/
An antibody supplier that provides a range of human antigens, serum and plasma, and cell culture reagents.
Proper citation: SunnyLab (RRID:SCR_000382) Copy
http://www.bioconductor.org/packages/release/bioc/html/iASeq.html
Software that uses a Bayesian hierarchical mixture model to learn correlation patterns of allele-specificity among multiple proteins.
Proper citation: iASeq (RRID:SCR_000420) Copy
http://www.massachusetts.edu/index.html
A five-campus public university system in Massachusetts. The system includes four universities, a medical school, and a satellite campus.
Proper citation: University of Massachusetts; Massachusetts; USA (RRID:SCR_000379) Copy
A national university in China with degree programs that include engineering, economics, humanities, law and art at the undergraduate, graduate and doctoral level.
Proper citation: Tianjin University; Tianjin; China (RRID:SCR_000372) Copy
A private, historically black university that offers degree programs at the undergraduate, graduate, doctoral and professional levels. The university has programs that include veterinarian studies, allied health, nursing, education
Proper citation: Tuskegee University; Alabama; USA (RRID:SCR_000373) Copy
A public research university in London with an emphasis in social science degree programs such as law, mathematics, public affairs and international history. The university offers degrees at the undergraduate, graduate and doctoral level.
Proper citation: London School of Economics and Political Science; London; United Kingdom (RRID:SCR_000370) Copy
http://international.tau.ac.il/
A public university in Israel with degree programs in areas such as arts, engineering, humanities, the law and medicine at the undergraduate and graduate level. The university has affiliated but independent schools that focus on specific areas such as music, environmental studies, dentistry, social work, education and neuroscience.
Proper citation: Tel Aviv University; Ramat Aviv; Israel (RRID:SCR_000371) Copy
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