Tools   Select Another Resource Report Type

http://purl.bioontology.org/ontology/MEDO

Ontology of experimental design for high-throughput mouse analysis pipelines.

Proper citation: Mouse Experimental Design Ontology (RRID:SCR_003879) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/SPO

THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available.

Proper citation: Skin Physiology Ontology (RRID:SCR_006253) Copy   

•   Source: SciCrunch Registry

http://cancer.gov/cancertopics/pdq/cancerdatabase

NCI''s comprehensive cancer database that contains summaries on a wide range of cancer topics; a registry of 8,000+ open and 19,000+ closed cancer clinical trials from around the world; a directory of professionals who provide genetics services; the NCI Dictionary of Cancer Terms, with definitions for 6,800+ cancer and medical terms; and the NCI Drug Dictionary, which has information on 2,300+ agents used in the treatment of cancer or cancer-related conditions. The PDQ cancer information summaries are peer reviewed and updated monthly by six editorial boards comprised of specialists in adult treatment, pediatric treatment, supportive care, screening and prevention, genetics, and complementary and alternative medicine. The Boards review current literature from more than 70 biomedical journals, evaluate its relevance, and synthesize it into clear summaries. Many of the summaries are also available in Spanish.

Proper citation: Physician Data Query (RRID:SCR_006833) Copy   

•   Source: SciCrunch Registry

https://obofoundry.org/ontology/cl.html

Ontology designed as a structured controlled vocabulary for cell types. It was constructed for use by the model organism and other bioinformatics databases. It includes cell types from prokaryotes, mammals, and fungi. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases.

Proper citation: Cell Type Ontology (RRID:SCR_004251) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/suicideo

Ontology of suicidology.

Proper citation: suicideonto (RRID:SCR_010452) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/EHDAA2

A structured controlled vocabulary of stage-specific anatomical structures of the human. It has been designed to mesh with the mouse anatomy and incorporates each Carnegie stage of development (CS1-20). The abstract version of the human developmental anatomy ontology compresses all the tissues present over Carnegie stages 1-20 into a single hierarchy. The heart, for example, is present from Carnegie Stage 9 onwards and is thus represented by 12 EHDA IDs (one for each stage). In the abstract mouse, it has a single ID so that the abstract term given as just ''heart'' really means ''heart (CS 9-20)''. Timing details will be added to the abstract version of the ontology in a future release.

Proper citation: Human Developmental Anatomy Ontology abstract version 2 (RRID:SCR_010337) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/ONTODM-KDD

Ontology for representing data mining investigations. Its goal is to allow the representation of knowledge discovery processes and be general enough to represent the data mining investigations. The ontology is based on the CRISP-DM process methodology.

Proper citation: Ontology of Data Mining Investigations (RRID:SCR_010394) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TM-MER

Ontology of the meridian value set used in the International Classification of Traditional Medicine.

Proper citation: Traditional Medicine Meridian Value Sets (RRID:SCR_010436) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/MCCL

A comprehensive ontology on primary and established cell lines-both normal and pathologic. It covers around 400 cell lines. This ontology has been built to include the major domains in the field of biology like anatomy, bio-molecules, chemicals and drugs, pathological conditions and genetic variations around the cell lines. An extensive network of relations has been built across these concepts to enable different combinations of queries. The ontology covers all cell lines from major sources like ATCC, DSMZ, ECACC, ICLC etc. and is built in OWL format.

Proper citation: Cell Line Ontology by Mahadevan (RRID:SCR_010281) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/NDFRT

Ontology of National Drug File - Reference Terminology Public Inferred Edition, 2008_03_11

Proper citation: National Drug File - Reference Terminology (RRID:SCR_010372) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CSSO

An ontology for describing clinical signs and symptoms.

Proper citation: Clinical Signs and Symptoms Ontology (RRID:SCR_007226) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/CCO

An application ontology integrating knowledge about the eukaryotic cell cycle.

Proper citation: Cell Cycle Ontology (RRID:SCR_007085) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/GLYCO

Ontology that provides an up-to-date knowledge base of experimentally verified glycan structures. Glycan (oligosaccharide or polysaccharide) structures are represented as trees of monosaccharide residues. Linkage to proteins and lipids is supported as well. Insertion of a new glycan is controlled by curation process that includes matching the new glycan against a canonical glyco-tree (a highly branched representation for a family of glycans).

Proper citation: Glycomics Ontology (RRID:SCR_010333) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/SNPO

A domain ontology that provides a formal representation (OWL-DL) of genomic variations. Despite its name it is not limited to the representation of SNPs but it encompasses genomic variations in a broader meaning. SNP-Ontology is general enough to enable the representation of variations observed in genome of various species. Latest versions of SNP-Ontology include the representation of haplotype and of CNV. The unambiguous representation of genomic variations provided by SNP-Ontology enables to integrate heterogeneous data related to genomic variations. To achieve this goal SNP-Ontology enables (1) to represent one variation in accordance with various ways that exist for describing it, (2) to represent the equivalence between two distinct descriptions of one variation, and (3) to represent correspondence between a genomic variation and its outcome at the transcriptome and proteome levels.

Proper citation: Single-Nucleotide Polymorphism Ontology (RRID:SCR_010428) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TOK

An Ontology describing Resources having different formats. This Ontology can be used to annotate and describe Terminological, Ontological Knowledge resources.

Proper citation: Terminological and Ontological Knowledge Resources Ontology (RRID:SCR_010432) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/EDDA

Ontology terms useful for machine learning experiments. The terminology appearing in JMLA has been enriched with terms from MeSH and Emtree, the controlled vocabularies for MEDLINE and Embase, respectively. Synonyms include American and British variants and some inverted terms.

Proper citation: EDDA Study Design Terminology (RRID:SCR_010312) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/TMA

An OWL schema that expands upon the Tissue microarray (TMA) data exchange specification to assist in data sharing and integration.

Proper citation: Tissue Microarray Ontology (RRID:SCR_010434) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/BCTEO

Ontology that describes the field of Tissue Engineering for what concerns bone and cartilage tissues.

Proper citation: Bone and Cartilage Tissue Engineering Ontology (RRID:SCR_006595) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/BHN

Nomenclature for innovative activity of biology and anatomo-pathology performed especially in the Centres Hospitalo-Universitaires is usually called activity off nomenclature (BHN for nomenclature and PHN biology for the anatomo-pathology off nomenclature). This character of nomenclature means that health insurance has not yet incorporated these acts in the Nomenclature of acts of biology medical (NABM) or the General Nomenclature of professional acts (NGAP).

Proper citation: Biologie Hors Nomenclature (RRID:SCR_010249) Copy   

•   Source: SciCrunch Registry

http://purl.bioontology.org/ontology/PTRANS

Vocabulary that describes a process that is the means of how a pathogen is transmitted from one host, reservoir, or source to another host. This transmission may occur either directly or indirectly and may involve animate vectors or inanimate vehicles.

Proper citation: Pathogen Transmission Ontology (RRID:SCR_010404) Copy   

•   Source: SciCrunch Registry