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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Traditional Medicine Other Factors Value Set Resource Report Resource Website |
Traditional Medicine Other Factors Value Set (RRID:SCR_010437) | TM-OTHER-FACTORS | data or information resource, ontology, controlled vocabulary | Ontology of the value set for the Other Factors property of the International Classification of Traditional Medicine (ICTM). | owl | is listed by: BioPortal | nlx_157614 | SCR_010437 | 2026-02-14 02:01:46 | 0 | |||||||||
|
Tribolium Ontology Resource Report Resource Website |
Tribolium Ontology (RRID:SCR_010440) | TRON | data or information resource, ontology, controlled vocabulary | Ontology about the anatomical structures of the red flour beetle Tribolium castaneum in the developmental stages larva, pupa and adult. | obo | is listed by: BioPortal | nlx_157617 | SCR_010440 | 2026-02-14 02:02:00 | 0 | |||||||||
|
Plant Anatomy Resource Report Resource Website |
Plant Anatomy (RRID:SCR_010408) | PAE | data or information resource, ontology, controlled vocabulary | THIS RESOURCES IS NO LONGER IN SERVICE, documented on April 23, 2014. REPLACED BY: Plant Ontology (PO). A controlled vocabulary of plant morphological and anatomical structures representing organs, tissues, cell types, and their biological relationships based on spatial and developmental organization. Note that this has been subsumed into the PO. This file is created by filtering plant_ontology_assert.obo to contain only terms from the plant anatomical entity branch of the PO. For more information, please see: http://palea.cgrb.oregonstate.edu/viewsvn/Poc/tags/live/ | obo |
is listed by: BioPortal has parent organization: Plant Ontology |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_157553 | SCR_010408 | 2026-02-14 02:01:59 | 0 | ||||||||
|
NanoParticle Ontology Resource Report Resource Website 1+ mentions |
NanoParticle Ontology (RRID:SCR_010369) | NPO | data or information resource, ontology, controlled vocabulary | An ontology that represents the basic knowledge of physical, chemical and functional characteristics of nanotechnology as used in cancer diagnosis and therapy. | owl | is listed by: BioPortal | Cancer | nlx_157497 | http://www.nano-ontology.org | SCR_010369 | 2026-02-14 02:01:57 | 1 | |||||||
|
National Cancer Institute Thesaurus Resource Report Resource Website |
National Cancer Institute Thesaurus (RRID:SCR_010370) | NCIT | data or information resource, ontology, controlled vocabulary | A vocabulary for clinical care, translational and basic research, and public information and administrative activities. | owl |
is used by: DisGeNET is listed by: BioPortal |
nlx_157498 | http://ncicb.nci.nih.gov/core/EVS | SCR_010370 | 2026-02-14 02:01:58 | 0 | ||||||||
|
Natural Products Ontology Resource Report Resource Website |
Natural Products Ontology (RRID:SCR_010373) | NATPRO | data or information resource, ontology, controlled vocabulary | An ontology for describing biological activities of natural products. | owl | is listed by: BioPortal | nlx_157501 | SCR_010373 | 2026-02-14 02:01:45 | 0 | |||||||||
|
Radiology Lexicon Resource Report Resource Website |
Radiology Lexicon (RRID:SCR_010418) | RADLEX | data or information resource, ontology, controlled vocabulary | A controlled terminology for radiology-a single unified source of radiology terms for radiology practice, education, and research. For license information see : http://www.rsna.org/uploadedFiles/RSNA/Content/Informatics/radlex_public_license_version_1-0-1.pdf Converted to use OWL format submissions | owl | is listed by: BioPortal | nlx_157567 | SCR_010418 | 2026-02-14 02:01:59 | 0 | |||||||||
|
Robert Hoehndorf Version of MeSH Resource Report Resource Website |
Robert Hoehndorf Version of MeSH (RRID:SCR_010419) | RH-MESH | data or information resource, ontology, controlled vocabulary | Ontology of a modified version of Medical Subjects Headings Thesaurus 2014, that is an OWL representation of MeSH so that it can be integrated with other ontologies represented in OWL. It contains all terms that are in MeSH and in the MeSH concept tree, including the pharmacological actions (represented as subclass relations). Concepts in the MeSH concept tree are merged with MeSH term ids. Note that, while this ontology is composed of MeSH terms, it does not correspond directly to UMLS MeSH. In particular, a single term in UMLS MeSH often results in multiple classes in this ontology. For example, in MeSH there is a single term with the label Heart. The internal code (unique identifier) for this term is A07.541. In this ontology there are two entirely different terms, both of which have the label Heart. The codes for these terms are A07.541 and D006321. | owl |
is listed by: BioPortal is related to: MeSH |
nlx_157577 | SCR_010419 | 2026-02-14 02:01:59 | 0 | |||||||||
|
Portfolio Management Application Resource Report Resource Website |
Portfolio Management Application (RRID:SCR_010411) | PMA | data or information resource, ontology, controlled vocabulary | Ontology of a system for tracking grants and producing reports - Users can access grant data through a query interface and a variety of pre-defined forms and reports. | owl | is listed by: BioPortal | nlx_157559 | SCR_010411 | 2026-02-14 02:01:59 | 0 | |||||||||
|
NeuroMorpho.Org species ontology old Resource Report Resource Website |
NeuroMorpho.Org species ontology old (RRID:SCR_010379) | NMOSP_1_6 | data or information resource, ontology, controlled vocabulary | Species taxonomy for the data curated in NeuroMorpho.Org. The existing ontologies are re-used as needed as the new metadata information for species and strains is deposited in NeuroMorpho.Org database. This species hierarchy consists of 56% of NCBI taxonomy and 39% of Rat strain ontology. The remaining 5% mostly consists of new concepts and few others from NIFSTD and MESH. | obo |
is listed by: BioPortal has parent organization: NeuroMorpho.Org |
nlx_157509 | SCR_010379 | 2026-02-14 02:01:58 | 0 | |||||||||
|
Protein-Protein Interaction Ontology Resource Report Resource Website |
Protein-Protein Interaction Ontology (RRID:SCR_010413) | PPIO | data or information resource, ontology, controlled vocabulary | A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions. | obo |
is listed by: BioPortal has parent organization: HUPO Proteomics Standards Initiative |
nlx_157561 | SCR_010413 | 2026-02-14 02:01:58 | 0 | |||||||||
|
Proteomics Data and Process Provenance Ontology Resource Report Resource Website |
Proteomics Data and Process Provenance Ontology (RRID:SCR_010414) | PROPREO | data or information resource, ontology, controlled vocabulary | A comprehensive proteomics data and process provenance ontology. | owl | is listed by: BioPortal | nlx_157562 | SCR_010414 | 2026-02-14 02:01:59 | 0 | |||||||||
|
Provenance Ontology Resource Report Resource Website 10+ mentions |
Provenance Ontology (RRID:SCR_010415) | PROVO | data or information resource, ontology, controlled vocabulary | Ontology that expresses the PROV Data Model using the OWL2 Web Ontology Language (OWL2) providing a set of classes, properties, and restrictions that can be used to represent and interchange provenance information generated in different systems and under different contexts. It can also be specialized to create new classes and properties to model provenance information for different applications and domains. | owl | is listed by: BioPortal | nlx_157563 | SCR_010415 | PROV-O | 2026-02-14 02:01:59 | 10 | ||||||||
|
Quantitative Imaging Biomarker Ontology Resource Report Resource Website |
Quantitative Imaging Biomarker Ontology (RRID:SCR_010417) | QIBO | data or information resource, ontology, controlled vocabulary | An ontology that describes various concepts in quantitative imaging biomarkers. | owl | is listed by: BioPortal | nlx_157565 | SCR_010417 | 2026-02-14 02:01:58 | 0 | |||||||||
|
Non-Randomized Controlled Trials Ontology Resource Report Resource Website |
Non-Randomized Controlled Trials Ontology (RRID:SCR_010380) | NONRCTO | data or information resource, ontology, controlled vocabulary | Ontology to help the systematic review and meta-analysis process of non randomized clinical trials. | owl | is listed by: BioPortal | nlx_157510 | SCR_010380 | 2026-02-14 02:01:58 | 0 | |||||||||
|
Nursing Care Coordination Ontology Resource Report Resource Website |
Nursing Care Coordination Ontology (RRID:SCR_010381) | NCCO | data or information resource, ontology, controlled vocabulary | Ontology that contains activities that nurses use while coordinating care among patients. | owl | is listed by: BioPortal | nlx_157511 | SCR_010381 | 2026-02-14 02:01:45 | 0 | |||||||||
|
Ontological Knowledge Base Model for Cystic Fibrosis Resource Report Resource Website |
Ontological Knowledge Base Model for Cystic Fibrosis (RRID:SCR_010382) | ONTOKBCF | data or information resource, ontology, controlled vocabulary | An ontological knowledge base model for cystic fibrosis. There are molecular genetic information (i.e. gene mutations) and health information included in OntoKBCF. The purposes of OntoKBCF include management of molecular genetic information and health information and embedding OntoKBCF into EHR settings. | owl | is listed by: BioPortal | Cystic fibrosis | nlx_157513 | SCR_010382 | 2026-02-14 02:01:57 | 0 | ||||||||
|
Ontology for Genetic Disease Investigations Resource Report Resource Website |
Ontology for Genetic Disease Investigations (RRID:SCR_010385) | OGDI | data or information resource, ontology, controlled vocabulary | Ontology used to model the scientific investigation, especially Genome-Wide Association Study (GWAS), to find out genetic susceptibility factor to disease, such as Diabetes. It models the genetic varaints, polymorphisms, statistical measurement, populations and other elements that are essential to determine a genetic susceptibility factor in GWAS study. It must be used with other two ontologies, in the case of Diabetes, :Ontology of Geographical Region (OGR) and Ontology of Glucose Metabolism Disorder (OGMD) . | owl | is listed by: BioPortal | nlx_157516 | SCR_010385 | 2026-02-14 02:01:58 | 0 | |||||||||
|
Immune Disorder Ontology Resource Report Resource Website |
Immune Disorder Ontology (RRID:SCR_010344) | IMMDIS | data or information resource, ontology, controlled vocabulary | Ontology generated as part of the Bioinformatics Integration Support Contract (BISC) that is based on the National Library of Medicine (NLM) Medical Subject Headings; National Cancer Institute Thesaurus; International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9-CM); ICD-10; and other open source public databases. Specific information may be available about a class, including Preferred_Name, DEFINITION, Synonym, etc. | obo, health, immunology | is listed by: BioPortal | NIAID ; Division of Allergy Immunology and Transplantation |
nlx_157438 | SCR_010344 | 2026-02-14 02:01:57 | 0 | ||||||||
|
InterNano Nanomanufacturing Taxonomy Resource Report Resource Website 1+ mentions |
InterNano Nanomanufacturing Taxonomy (RRID:SCR_010346) | InterNano | data or information resource, ontology, controlled vocabulary | A custom-built terminology to describe the nanomanufacturing enterprise. | owl | is listed by: BioPortal | NSF CMMI-1025020 | nlx_157442 | SCR_010346 | 2026-02-14 02:01:45 | 1 |
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