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URL: https://github.com/QuackenbushLab/NetworkDataCompanion
Proper Citation: NetworkDataCompanion (RRID:SCR_026532)
Description: Software R library of utilities for performing analyses on TCGA and GTEx data using the Network Zoo. Streamlines routine steps in TCGA data processing, including filtering and mapping gene and sample identifiers between modalities and allows modality-specific data transformation, such as normalization and cleaning.
Resource Type: software resource, source code, software toolkit, software library
Defining Citation: PMID:39574772
Keywords: TCGA and GTEx data analysis, TCGA data processing, filtering and mapping gene, normalization and cleaning,
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