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URL: http://hibberdlab.com/transrate/
Proper Citation: TransRate (RRID:SCR_017034)
Description: Open source software tool for de novo transcriptome assembly reference free quality analysis. Used to examine assembly in detail and compare it to sequencing reads, reporting quality scores for contigs and assemblies to allow to choose between assemblers and parameters, filter out bad contigs from an assembly, and help decide when to stop trying to improve assembly.
Resource Type: software application, data processing software, data analysis software, software resource
Defining Citation: PMID:27252236
Keywords: de novo, transcriptome, assembly, reference, free, quality, analysis, sequencing, read, contig, parameter
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