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URL: http://prism.ccbb.ku.edu.tr/prism/
Proper Citation: Protein Interactions by Structural Matching (RRID:SCR_002116)
Description: It is a web-server that can be used to explore protein interfaces and predict protein-protein interactions. It is a website for protein interface analysis and prediction of putative protein-protein interactions. It is composed of a database holding protein interface structures derived from the Protein Data Bank (PDB). The server also includes summary information about related proteins and an interactive protein interface viewer. A list of putative protein-protein interactions obtained by running our prediction algorithm can also be accessed. These results are applied to a set of protein structures obtained from the PDB at the time of algorithm execution. Users can browse through the non-redundant dataset of representative interfaces on which the prediction algorithm depends, retrieve the list of similar structures to these interfaces or see the results of interaction predictions for a particular protein. Another service provided is interactive prediction. This is done by running the algorithm for user input structures.
Abbreviations: P.R.I.S.M.
Synonyms: Protein Interactions by Structural Matching
Resource Type: data or information resource, database
Defining Citation: PMID:15991339, PMID:21886100
Keywords: interaction, protein, structure
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